RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ZFRQ96KR1 1074 aaKnown RBP16.62■□□□□ 0.25
DDX54-205ENST00000548786 ZSWIM1Q9BR11 485 aa16.62■□□□□ 0.25
DDX54-205ENST00000548786 FAM124BQ9H5Z6 455 aaPredicted RBP16.62■□□□□ 0.25
DDX54-205ENST00000548786 ECT2Q9H8V3 914 aa16.62■□□□□ 0.25
DDX54-205ENST00000548786 PNPLA8Q9NP80 782 aa16.62■□□□□ 0.25
DDX54-205ENST00000548786 KCNJ18B7U540 433 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 M0QYV0 167 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 LAMTOR5O43504 91 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 CHRNB1P11230 501 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 RARGP13631 454 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 GJA4P35212 333 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 USP8P40818 1118 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 RGS7P49802 495 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 TKTL1P51854 596 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 CSTF1Q05048 431 aaKnown RBP16.61■□□□□ 0.25
DDX54-205ENST00000548786 BST2Q10589 180 aaKnown RBP16.61■□□□□ 0.25
DDX54-205ENST00000548786 KCNJ12Q14500 433 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 MAN2A1Q16706 1144 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 EXOC3L4Q17RC7 722 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 C10orf120Q5SQS8 335 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 SNX30Q5VWJ9 437 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 SASS6Q6UVJ0 657 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 SCD5Q86SK9 330 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 MSANTD3Q96H12 275 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 ACP6Q9NPH0 428 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 SH3BP1Q9Y3L3 701 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 NFE2L3Q9Y4A8 694 aa16.61■□□□□ 0.25
DDX54-205ENST00000548786 CACNA1IQ9P0X4 2223 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 XPO1O14980 1071 aaKnown RBP16.6■□□□□ 0.25
DDX54-205ENST00000548786 NFATC1O95644 943 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 MBD3O95983 291 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 PAEPP09466 180 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 LCP1P13796 627 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 TCF3P15923 654 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 RPS9P46781 194 aaKnown RBP16.6■□□□□ 0.25
DDX54-205ENST00000548786 TUBP50607 506 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 MLLT6P55198 1093 aaPredicted RBP16.6■□□□□ 0.25
DDX54-205ENST00000548786 ADIGQ0VDE8 80 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 LRRC32Q14392 662 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 CCDC183Q5T5S1 534 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 RBM43Q6ZSC3 357 aaKnown RBP16.6■□□□□ 0.25
DDX54-205ENST00000548786 CCDC186Q7Z3E2 898 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 ALYREFQ86V81 257 aaKnown RBP16.6■□□□□ 0.25
DDX54-205ENST00000548786 DDX42Q86XP3 938 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX54-205ENST00000548786 MIB1Q86YT6 1006 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 MAML2Q8IZL2 1156 aaPredicted RBP16.6■□□□□ 0.25
DDX54-205ENST00000548786 SECISBP2LQ93073 1101 aaKnown RBP16.6■□□□□ 0.25
DDX54-205ENST00000548786 TUBGCP2Q9BSJ2 902 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 ULBP1Q9BZM6 244 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 LRRC4Q9HBW1 653 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 FBRSL1Q9HCM7 1045 aaKnown RBP16.6■□□□□ 0.25
DDX54-205ENST00000548786 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX54-205ENST00000548786 TAB2Q9NYJ8 693 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 AJAP1Q9UKB5 411 aaPredicted RBP16.6■□□□□ 0.25
DDX54-205ENST00000548786 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.6■□□□□ 0.25
DDX54-205ENST00000548786 R4GN57 208 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 WDR87Q6ZQQ6 2873 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 MYO15AQ9UKN7 3530 aa16.6■□□□□ 0.25
DDX54-205ENST00000548786 ZFHX2Q9C0A1 2572 aaPredicted RBP16.59■□□□□ 0.25
DDX54-205ENST00000548786 EGFP01133 1207 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 CYP17A1P05093 508 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 HMBSP08397 361 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 SP9P0CG40 484 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 PON1P27169 355 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 ATP5C1P36542 298 aaKnown RBP16.59■□□□□ 0.25
DDX54-205ENST00000548786 GALK1P51570 392 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 ZNF132P52740 706 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 GAS6Q14393 721 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 VWA3BQ502W6 1294 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 MIIPQ5JXC2 388 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 FSTL4Q6MZW2 842 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 BBS7Q8IWZ6 715 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 SIX6OS1Q8N1H7 587 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 P2RY13Q9BPV8 354 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 IRF2BPLQ9H1B7 796 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 CHRDQ9H2X0 955 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 NDST4Q9H3R1 872 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 CYLDQ9NQC7 956 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 APEX2Q9UBZ4 518 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 RASAL2Q9UJF2 1139 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 KIAA1257Q9ULG3 409 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 USP3Q9Y6I4 520 aa16.59■□□□□ 0.25
DDX54-205ENST00000548786 LETM1O95202 739 aaPredicted RBP16.58■□□□□ 0.24
DDX54-205ENST00000548786 ZBED1O96006 694 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 PNMA6AP0CW24 399 aaPredicted RBP16.58■□□□□ 0.24
DDX54-205ENST00000548786 SETSIPP0DME0 302 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 RALAP11233 206 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 MAGEA9P43362 315 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 MRE11P49959 708 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 MFAP3P55082 362 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 YWHAGP61981 247 aaKnown RBP eCLIP16.58■□□□□ 0.24
DDX54-205ENST00000548786 EFEMP1Q12805 493 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 GRSF1Q12849 480 aaKnown RBP eCLIP16.58■□□□□ 0.24
DDX54-205ENST00000548786 NR1H3Q13133 447 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 CCINQ13939 588 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 STX1AQ16623 288 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 TCP11X2Q5H9J9 407 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 RAB41Q5JT25 222 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 C1orf228Q6PIY5 440 aa16.58■□□□□ 0.24
DDX54-205ENST00000548786 LCLAT1Q6UWP7 414 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms