RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 M0QYV0 167 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 MAN2B1O00754 1011 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 TBX18O95935 607 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 DCNP07585 359 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 ARSAP15289 507 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 USP8P40818 1118 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 RUNX3Q13761 415 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 PDGFRLQ15198 375 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 ITPRIPL2Q3MIP1 535 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 SLC35F5Q8WV83 523 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 OSCP1Q8WVF1 389 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 FAM3CQ92520 227 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 SECISBP2LQ93073 1101 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 ZFRQ96KR1 1074 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 FUCA2Q9BTY2 467 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 NACA2Q9H009 215 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 C8orf33Q9H7E9 229 aaPredicted RBP19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 LRRC4Q9HBW1 653 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 ACP6Q9NPH0 428 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 DUS2Q9NX74 493 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 LIMA1Q9UHB6 759 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 NAGPAQ9UK23 515 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 MRPS17Q9Y2R5 130 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 WNT6Q9Y6F9 365 aa19.71■□□□□ 0.75
PRPF40B-206ENST00000547764 OTOL1A6NHN0 477 aaPredicted RBP19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 LETM1O95202 739 aaPredicted RBP19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 TPM2P07951 284 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 RARGP13631 454 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 ZNF18P17022 549 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 TARSP26639 723 aaKnown RBP19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 PSEN1P49768 467 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 COPB1P53618 953 aaKnown RBP19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 KLHDC7AQ5VTJ3 777 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 PM20D1Q6GTS8 502 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 PMF1Q6P1K2 205 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 CCDC105Q8IYK2 499 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 ZNF606Q8WXB4 792 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 KCTD13Q8WZ19 329 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 NELL2Q99435 816 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 BPIFA3Q9BQP9 254 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 LSM14BQ9BX40 385 aaKnown RBP19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 OSBPL6Q9BZF3 934 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 ULBP1Q9BZM6 244 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 LINC00597Q9H2U6 94 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 CFAP97Q9P2B7 532 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 NUDT5Q9UKK9 219 aa19.7■□□□□ 0.74
PRPF40B-206ENST00000547764 SYCE3A1L190 88 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 SPECC1L-ADORA2AF8WAN1 911 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 FOXN3O00409 490 aaPredicted RBP19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 ZBED1O96006 694 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 CDK11BP21127 795 aaKnown RBP19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 GNA15P30679 374 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 CTHP32929 405 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 ATP5C1P36542 298 aaKnown RBP19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 IFNAR2P48551 515 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 RGS7P49802 495 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 NUBP1P53384 320 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 ADIGQ0VDE8 80 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 EML3Q32P44 896 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 SMYD5Q6GMV2 418 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 RALGPS2Q86X27 583 aaPredicted RBP19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 DDX42Q86XP3 938 aaKnown RBP eCLIP19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 ZNF687Q8N1G0 1237 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 ANKRD20A12PQ8NF67 263 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 NDRG1Q92597 394 aaKnown RBP19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 MSANTD3Q96H12 275 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 KCNH6Q9H252 994 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 CLIC5Q9NZA1 410 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 DLGAP2Q9P1A6 1054 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 NDRG2Q9UN36 371 aaKnown RBP19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 FHOD1Q9Y613 1164 aa19.69■□□□□ 0.74
PRPF40B-206ENST00000547764 LRRC10BA6NIK2 292 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 SCAMP3O14828 347 aaKnown RBP19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 THAP12O43422 761 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 MED7O43513 233 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 GABBR2O75899 941 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 RALAP11233 206 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 LCP1P13796 627 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 GPD2P43304 727 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 FKBP15Q5T1M5 1219 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 DENND1BQ6P3S1 775 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 KLHDC10Q6PID8 442 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 C1orf228Q6PIY5 440 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 TXNDC11Q6PKC3 985 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 BHLHA9Q7RTU4 235 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 DHX40Q8IX18 779 aaKnown RBP19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 ARHGAP18Q8N392 663 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 ZNF276Q8N554 614 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 KIAA1958Q8N8K9 716 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 PRSS33Q8NF86 280 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 ATP2A3Q93084 1043 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 PRRX2Q99811 253 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 KLF16Q9BXK1 252 aaPredicted RBP19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 ECT2Q9H8V3 914 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 WDFY4Q6ZS81 3184 aa19.68■□□□□ 0.74
PRPF40B-206ENST00000547764 MDM4O15151 490 aa19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 GALR2O43603 387 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 PNMA6AP0CW24 399 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-206ENST00000547764 ATP1A3P13637 1013 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms