RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 NTSR1P30989 418 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 UBA7P41226 1012 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 WASP42768 502 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 RBP5P82980 135 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 TAF10Q12962 218 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 C10orf76Q5T2E6 689 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 BTBD8Q5XKL5 378 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 MCTP1Q6DN14 999 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 DPH6Q7L8W6 267 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 ZNF720Q7Z2F6 126 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 GLRX5Q86SX6 157 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 PLPP6Q8IY26 295 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 NAT16Q8N8M0 369 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 TERB1Q8NA31 727 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 SPRYD3Q8NCJ5 442 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 PTCD2Q8WV60 388 aaKnown RBP14.35□□□□□ -0.11
CCDC59-202ENST00000547758 KBTBD7Q8WVZ9 684 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 OTUB2Q96DC9 234 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 PCED1BQ96HM7 432 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 ZSCAN31Q96LW9 406 aaPredicted RBP14.35□□□□□ -0.11
CCDC59-202ENST00000547758 MTMR12Q9C0I1 747 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 DEC1Q9P2X7 70 aa14.35□□□□□ -0.11
CCDC59-202ENST00000547758 KNTC1P50748 2209 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 F8VP50 259 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 HOXC11O43248 304 aaPredicted RBP14.34□□□□□ -0.11
CCDC59-202ENST00000547758 CBFA2T3O75081 653 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 TMEM191BP0C7N4 346 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 GNSP15586 552 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 FOXK1P85037 733 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 MYO1EQ12965 1108 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 GRIK2Q13002 908 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 SYCP2LQ5T4T6 812 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 NUDT18Q6ZVK8 323 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 LIMS2Q7Z4I7 341 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 SLCO6A1Q86UG4 719 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 SFR1Q86XK3 245 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 MIB1Q86YT6 1006 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 RASSF8Q8NHQ8 419 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 LARP4BQ92615 738 aaKnown RBP14.34□□□□□ -0.11
CCDC59-202ENST00000547758 ZNF419Q96HQ0 510 aaPredicted RBP14.34□□□□□ -0.11
CCDC59-202ENST00000547758 SLITRK1Q96PX8 696 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 ZDHHC5Q9C0B5 715 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 CD248Q9HCU0 757 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 DKK4Q9UBT3 224 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 PCOLCE2Q9UKZ9 415 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 HCN2Q9UL51 889 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 EXOC7Q9UPT5 735 aa14.34□□□□□ -0.11
CCDC59-202ENST00000547758 TP53BP1Q12888 1972 aaPredicted RBP14.33□□□□□ -0.12
CCDC59-202ENST00000547758 NDUFS2O75306 463 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 LDHAP00338 332 aaKnown RBP14.33□□□□□ -0.12
CCDC59-202ENST00000547758 PDGFRBP09619 1106 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 KCNA1Q09470 495 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 WDR45BQ5MNZ6 344 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 TDRD10Q5VZ19 366 aaKnown RBP14.33□□□□□ -0.12
CCDC59-202ENST00000547758 EGFLAMQ63HQ2 1017 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 KRI1Q8N9T8 703 aaKnown RBP14.33□□□□□ -0.12
CCDC59-202ENST00000547758 GLIS3Q8NEA6 775 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 MYCBPAPQ8TBZ2 947 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 IPO4Q8TEX9 1081 aaKnown RBP14.33□□□□□ -0.12
CCDC59-202ENST00000547758 FOXJ1Q92949 421 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 ERLEC1Q96DZ1 483 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 HPDLQ96IR7 371 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 ZFRQ96KR1 1074 aaKnown RBP14.33□□□□□ -0.12
CCDC59-202ENST00000547758 C8orf48Q96LL4 319 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 STRA6Q9BX79 667 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 PDE11AQ9HCR9 933 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 CD93Q9NPY3 652 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 KIAA1522Q9P206 1035 aaPredicted RBP14.33□□□□□ -0.12
CCDC59-202ENST00000547758 STARD13Q9Y3M8 1113 aa14.33□□□□□ -0.12
CCDC59-202ENST00000547758 R3HCC1Q9Y3T6 440 aaKnown RBP14.33□□□□□ -0.12
CCDC59-202ENST00000547758 GOLGA8IPA6NC78 632 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 GOLGA8JA6NMD2 632 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 TRIM24O15164 1050 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 GARTP22102 1010 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 WARSP23381 471 aaKnown RBP14.32□□□□□ -0.12
CCDC59-202ENST00000547758 DDIT3P35638 169 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 IFRD2Q12894 506 aaPredicted RBP14.32□□□□□ -0.12
CCDC59-202ENST00000547758 ANO4Q32M45 955 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 MDH1BQ5I0G3 518 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 L1TD1Q5T7N2 865 aaKnown RBP14.32□□□□□ -0.12
CCDC59-202ENST00000547758 SDE2Q6IQ49 451 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 TMPRSS7Q7RTY8 843 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 CHPFQ8IZ52 775 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 ADAM32Q8TC27 787 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 SETD7Q8WTS6 366 aaKnown RBP14.32□□□□□ -0.12
CCDC59-202ENST00000547758 ANKRD36BP1Q96IX9 119 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 ACCSQ96QU6 501 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 ACOX2Q99424 681 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 MRPL44Q9H9J2 332 aaKnown RBP14.32□□□□□ -0.12
CCDC59-202ENST00000547758 SPHK2Q9NRA0 654 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 SH3BP1Q9Y3L3 701 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 KALRNO60229 2985 aa14.32□□□□□ -0.12
CCDC59-202ENST00000547758 CKAP5Q14008 2032 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 COCHO43405 550 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 MAOBP27338 520 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 CACNA2D1P54289 1103 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 GRAMD4Q6IC98 578 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 HS2ST1Q7LGA3 356 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 DYMQ7RTS9 669 aa14.31□□□□□ -0.12
CCDC59-202ENST00000547758 TMEM25Q86YD3 366 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms