RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 TIMM22Q9Y584 194 aa12.39□□□□□ -0.43
RBFOX1-208ENST00000547372 ASTN1O14525 1302 aa12.39□□□□□ -0.43
RBFOX1-208ENST00000547372 PSMD11O00231 422 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 GAS7O60861 476 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 RPA1P27694 616 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 CDK9P50750 372 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 ANO4Q32M45 955 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 PPP2R2DQ66LE6 453 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 SLC47A2Q86VL8 602 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 BORCS5Q969J3 196 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 C12orf43Q96C57 262 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 MAELQ96JY0 434 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 TMEM79Q9BSE2 394 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 ANO3Q9BYT9 981 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 APOBEC2Q9Y235 224 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 PCDHGA3Q9Y5H0 932 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 RGPD5Q99666 1765 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 ARHGEF37A1IGU5 675 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 FAM155BO75949 473 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 HSPA8P11142 646 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 STIP1P31948 543 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 PKNOX1P55347 436 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 PTK7Q13308 1070 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 LIN9Q5TKA1 542 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 CATSPER3Q86XQ3 398 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 MYO1HQ8N1T3 1032 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 ANKRD36BP1Q96IX9 119 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 C11orf70Q9BRQ4 267 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 DKK3Q9UBP4 350 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 ATP11BQ9Y2G3 1177 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 CAPN14A8MX76 684 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 PLSCR1O15162 318 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 EDIL3O43854 480 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 DDHD2O94830 711 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 MCF2P10911 925 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 GSSP48637 474 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 NDST2P52849 883 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 FAAP100Q0VG06 881 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 BSPRYQ5W0U4 402 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 SNX29P2Q8IUI4 249 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 PEX5LQ8IYB4 626 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 SERAC1Q96JX3 654 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 GIN1Q9NXP7 522 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 DNPEPQ9ULA0 475 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 ZNF804BA4D1E1 1349 aa12.38□□□□□ -0.43
RBFOX1-208ENST00000547372 CHEK2O96017 543 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 HLA-DOAP06340 250 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 TNNI1P19237 187 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 HIF1AQ16665 826 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 PGS1Q32NB8 556 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 ATP13A4Q4VNC1 1196 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 SBK1Q52WX2 424 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 MFSD14BQ5SR56 506 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 TDRPQ86YL5 185 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 CPA5Q8WXQ8 436 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 DCPSQ96C86 337 aaKnown RBP12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 TMEM121Q9BTD3 319 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 MAN1C1Q9NR34 630 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 NUB1Q9Y5A7 615 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 N6AMT1Q9Y5N5 214 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 ST14Q9Y5Y6 855 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 SIN3BO75182 1162 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 LYPLA1O75608 230 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 IREB2P48200 963 aaKnown RBP12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 NME3Q13232 169 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 LRP8Q14114 963 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 CLPPQ16740 277 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 FAAH2Q6GMR7 532 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 RTKN2Q8IZC4 609 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 ADGRF4Q8IZF3 695 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 AHI1Q8N157 1196 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 ZNF786Q8N393 782 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 BANPQ8N9N5 519 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 ZSWIM2Q8NEG5 633 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 BTG4Q9NY30 223 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 KCNK4Q9NYG8 393 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 EPS15L1Q9UBC2 864 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 PNMA6FA0A0J9YX94 578 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 CFAP99D6REC4 459 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 TM9SF1O15321 606 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 ENO2P09104 434 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 SLC12A3P55017 1021 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 MFAP3P55082 362 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 FLOT2Q14254 428 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 FGD3Q5JSP0 725 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 VWA5B1Q5TIE3 1220 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 CASC4Q6P4E1 433 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 PPM1NQ8N819 430 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 FBXO36Q8NEA4 188 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 VTA1Q9NP79 307 aa12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 SAE1Q9UBE0 346 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-208ENST00000547372 DCXO43602 365 aa12.36□□□□□ -0.43
RBFOX1-208ENST00000547372 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
RBFOX1-208ENST00000547372 WDR44Q5JSH3 913 aa12.36□□□□□ -0.43
RBFOX1-208ENST00000547372 PRR23BQ6ZRT6 265 aa12.36□□□□□ -0.43
RBFOX1-208ENST00000547372 CDHR3Q6ZTQ4 885 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms