RNA–Protein interactions for RNA: ENST00000547318.5

LETMD1-209, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 2,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-209ENST00000547318 CEP120Q8N960 986 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 FAM13CQ8NE31 585 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 SHCBP1Q8NEM2 672 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 C7orf26Q96N11 449 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 SIKE1Q9BRV8 207 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 DCLRE1BQ9H816 532 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 PLEKHA5Q9HAU0 1116 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 USP29Q9HBJ7 922 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 SLC5A4Q9NY91 659 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 CNTN3Q9P232 1028 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 TJP2Q9UDY2 1190 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 TRIM33Q9UPN9 1127 aa15.21■□□□□ 0.02
LETMD1-209ENST00000547318 COPEO14579 308 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 ZBED1O96006 694 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 CYP2C8P10632 490 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 GCKP35557 465 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 BCAR1P56945 870 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 OSTNP61366 133 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 YWHAGP61981 247 aaKnown RBP eCLIP15.2■□□□□ 0.02
LETMD1-209ENST00000547318 LAMC2Q13753 1193 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 AMHR2Q16671 573 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 KBTBD12Q3ZCT8 623 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 ANKRD20A2Q5SQ80 823 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 STXBP5Q5T5C0 1151 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 ANKRD20A1Q5TYW2 823 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 ANKRD20A3Q5VUR7 823 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 PRAMEF18Q5VWM3 479 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 OR6B2Q6IFH4 312 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 LONP2Q86WA8 852 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 PLD5Q8N7P1 536 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.2■□□□□ 0.02
LETMD1-209ENST00000547318 SKA1Q96BD8 255 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 TWNKQ96RR1 684 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 PEBP4Q96S96 227 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 MMP19Q99542 508 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 PDZD7Q9H5P4 517 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 XAB2Q9HCS7 855 aaKnown RBP15.2■□□□□ 0.02
LETMD1-209ENST00000547318 RAB6BQ9NRW1 208 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 PLXNA1Q9UIW2 1896 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 OTOFQ9HC10 1997 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 RALGAPA2Q2PPJ7 1873 aa15.2■□□□□ 0.02
LETMD1-209ENST00000547318 I3L4J1 428 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 DIAPH2O60879 1101 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 CNMDO75829 334 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 GNAZP19086 355 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 SDC4P31431 198 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 PTPN9P43378 593 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 IREB2P48200 963 aaKnown RBP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 YWHAZP63104 245 aaKnown RBP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 SARNPP82979 210 aaKnown RBP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 GAD2Q05329 585 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 NAB1Q13506 487 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 DCAF4L1Q3SXM0 396 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 GADL1Q6ZQY3 521 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 FAM183BPQ6ZVS7 135 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 TRIM50Q86XT4 487 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 APLFQ8IW19 511 aaPredicted RBP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 GTF3C2Q8WUA4 911 aaPredicted RBP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 MRRFQ96E11 262 aaKnown RBP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 NSL1Q96IY1 281 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 FGD4Q96M96 766 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 BTBD10Q9BSF8 475 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 SLC4A5Q9BY07 1137 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 ETNK2Q9NVF9 386 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 KCNK4Q9NYG8 393 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 GTF2IRD1Q9UHL9 959 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 TSPAN16Q9UKR8 245 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 TTLL3Q9Y4R7 772 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 MGAMO43451 1857 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 A8MUI8 341 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 BIRC5O15392 142 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 PEX11AO75192 247 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 GCATO75600 419 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 FGFR1P11362 822 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 SERPINB4P48594 390 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 CLCN3P51790 818 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 NDST1P52848 882 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 SLC6A3Q01959 620 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 SLC10A6Q3KNW5 377 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 BZW1Q7L1Q6 419 aaKnown RBP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 TMEM110Q86TL2 294 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 MTDHQ86UE4 582 aaKnown RBP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 UNC93AQ86WB7 457 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 ERO1BQ86YB8 467 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 HACE1Q8IYU2 909 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 MIEF2Q96C03 454 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 ACAP3Q96P50 834 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 ASCC2Q9H1I8 757 aaPredicted RBP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 DPP3Q9NY33 737 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 SLC17A7Q9P2U7 560 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 ZC3H7BQ9UGR2 993 aaKnown RBP15.19■□□□□ 0.02
LETMD1-209ENST00000547318 LRRC42Q9Y546 428 aa15.19■□□□□ 0.02
LETMD1-209ENST00000547318 KCNN4O15554 427 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 TXNP10599 105 aaKnown RBP15.18■□□□□ 0.02
LETMD1-209ENST00000547318 NEFHP12036 1026 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 GRM5P41594 1212 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 MAGEA3P43357 314 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 FAAP100Q0VG06 881 aa15.18■□□□□ 0.02
LETMD1-209ENST00000547318 ZRSR2Q15696 482 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms