RNA–Protein interactions for RNA: ENST00000547230.5

CACNB3-204, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3 BASIC

Gene CACNB3, Length 2,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-204ENST00000547230 FAF2Q96CS3 445 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 NR1H4Q96RI1 486 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-204ENST00000547230 PEBP4Q96S96 227 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 CPXM1Q96SM3 734 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 ECSITQ9BQ95 431 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 CCDC106Q9BWC9 280 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 C20orf27Q9GZN8 174 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 WWP1Q9H0M0 922 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 RPAP3Q9H6T3 665 aaPredicted RBP13.19□□□□□ -0.3
CACNB3-204ENST00000547230 POPDC2Q9HBU9 364 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 SMYD2Q9NRG4 433 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 NDE1Q9NXR1 346 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 SIRPGQ9P1W8 387 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 PDP2Q9P2J9 529 aa13.19□□□□□ -0.3
CACNB3-204ENST00000547230 MEI4A8MW99 385 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 VWA5AO00534 786 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 ERBB2P04626 1255 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 SNRPAP09012 282 aaKnown RBP13.18□□□□□ -0.3
CACNB3-204ENST00000547230 RAP1GAPP47736 663 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 ALDH18A1P54886 795 aaKnown RBP13.18□□□□□ -0.3
CACNB3-204ENST00000547230 DSG1Q02413 1049 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 CAPSQ13938 189 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 ZNF772Q68DY9 489 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-204ENST00000547230 XYLT1Q86Y38 959 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 AKT1S1Q96B36 256 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 TUBGCP5Q96RT8 1024 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 TTC1Q99614 292 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 SLC13A1Q9BZW2 595 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 ASCC2Q9H1I8 757 aaPredicted RBP13.18□□□□□ -0.3
CACNB3-204ENST00000547230 HBS1LQ9Y450 684 aaKnown RBP13.18□□□□□ -0.3
CACNB3-204ENST00000547230 COL4A5P29400 1685 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 MGAMO43451 1857 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 PRR5-ARHGAP8B1AHC4 643 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 CHADO15335 359 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 KRT37O76014 449 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 TRUB2O95900 331 aaKnown RBP13.18□□□□□ -0.3
CACNB3-204ENST00000547230 OATP04181 439 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 POLR2BP30876 1174 aaKnown RBP13.18□□□□□ -0.3
CACNB3-204ENST00000547230 STIP1P31948 543 aaKnown RBP13.18□□□□□ -0.3
CACNB3-204ENST00000547230 YWHAEP62258 255 aaKnown RBP13.18□□□□□ -0.3
CACNB3-204ENST00000547230 ARHGAP8P85298 464 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 CDC16Q13042 620 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 ORC1Q13415 861 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 MTMR2Q13614 643 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 UBAP2LQ14157 1087 aaKnown RBP13.18□□□□□ -0.3
CACNB3-204ENST00000547230 ZNF699Q32M78 642 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 FAXCQ5TGI0 409 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 ATG16L1Q676U5 607 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 TRIM42Q8IWZ5 723 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 GBP5Q96PP8 586 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 EBF4Q9BQW3 602 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 RAB6BQ9NRW1 208 aa13.18□□□□□ -0.3
CACNB3-204ENST00000547230 BAG2O95816 211 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 CSH1P0DML2 217 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 CSH2P0DML3 217 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 AP3M2P53677 418 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 SP2Q02086 613 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 DNAL1Q4LDG9 190 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 C6orf163Q5TEZ5 329 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 C1orf146Q5VVC0 180 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 NUDCD3Q8IVD9 361 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 PCMTD2Q9NV79 361 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 ZC3H7BQ9UGR2 993 aaKnown RBP13.17□□□□□ -0.3
CACNB3-204ENST00000547230 ZNF180Q9UJW8 692 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 USP18Q9UMW8 372 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 BUD23O43709 281 aaKnown RBP13.17□□□□□ -0.3
CACNB3-204ENST00000547230 SNNO75324 88 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-204ENST00000547230 RTN3O95197 1032 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-204ENST00000547230 TOP3BO95985 862 aaKnown RBP13.17□□□□□ -0.3
CACNB3-204ENST00000547230 CRABP2P29373 138 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 AP2B1P63010 937 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 TRPC3Q13507 836 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 ZCCHC23Q6ZST2 131 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 RAPH1Q70E73 1250 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 NSUN6Q8TEA1 469 aaKnown RBP13.17□□□□□ -0.3
CACNB3-204ENST00000547230 AZIN2Q96A70 460 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 MTBPQ96DY7 904 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 TRIM56Q9BRZ2 755 aaKnown RBP13.17□□□□□ -0.3
CACNB3-204ENST00000547230 FAM192AQ9GZU8 254 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 XYLT2Q9H1B5 865 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 RSAD1Q9HA92 442 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 ZNF302Q9NR11 478 aa13.17□□□□□ -0.3
CACNB3-204ENST00000547230 H7C0C1 242 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 PRKCHP24723 683 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 ATP5OP48047 213 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 CDH6P55285 790 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
CACNB3-204ENST00000547230 SH3PXD2AQ5TCZ1 1133 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 SNRNP48Q6IEG0 339 aaKnown RBP13.16□□□□□ -0.3
CACNB3-204ENST00000547230 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 CYP4V2Q6ZWL3 525 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-204ENST00000547230 CAND1Q86VP6 1230 aaKnown RBP13.16□□□□□ -0.3
CACNB3-204ENST00000547230 CRLF3Q8IUI8 442 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 SLC7A3Q8WY07 619 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 RILPQ96NA2 401 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 LHX5Q9H2C1 402 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
CACNB3-204ENST00000547230 USP29Q9HBJ7 922 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms