RNA–Protein interactions for RNA: ENST00000547204.5

ARFGAP1-220, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2 BASIC

Gene ARFGAP1, Length 1,327 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-220ENST00000547204 SLC27A5Q9Y2P5 690 aa17.71■□□□□ 0.42
ARFGAP1-220ENST00000547204 MIF4GDA9UHW6 222 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 TNFRSF10AO00220 468 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 DPYSL4O14531 572 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 TNFRSF10BO14763 440 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 HSF2BPO75031 334 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 GRAP2O75791 330 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 ABLIM3O94929 683 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 ZBED1O96006 694 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 GLI1P08151 1106 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 FLT3P36888 993 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 GPR15P49685 360 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 ZNF143P52747 638 aaPredicted RBP17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 SLC5A3P53794 718 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 RNASE9P60153 205 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 RPL10AP62906 217 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 DUSP4Q13115 394 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 DDR2Q16832 855 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 TMC7Q7Z402 723 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 ZNF461Q8TAF7 563 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 RXFP2Q8WXD0 754 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 IRGQQ8WZA9 623 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 MRPL38Q96DV4 380 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 HES6Q96HZ4 224 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 CRISPLD1Q9H336 500 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 ALG13Q9NP73 1137 aaKnown RBP17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 HSFX1Q9UBD0 423 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 SAR1BQ9Y6B6 198 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 USP3Q9Y6I4 520 aa17.7■□□□□ 0.42
ARFGAP1-220ENST00000547204 TEX28O15482 410 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 DAB1O75553 588 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 USP17L7P0C7H9 530 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 BMP1P13497 986 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 PDGFRAP16234 1089 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 PRLRP16471 622 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 TCP1P17987 556 aaKnown RBP17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 CTNNA2P26232 953 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 CA8P35219 290 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 TUFMP49411 452 aaKnown RBP17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 TUBB2AQ13885 445 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 PM20D1Q6GTS8 502 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 TRNP1Q6NT89 227 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 CPNE8Q86YQ8 564 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 NUP93Q8N1F7 819 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 SPPL3Q8TCT6 385 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 NDRG1Q92597 394 aaKnown RBP17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 CD101Q93033 1021 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 FAM149B1Q96BN6 582 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 SPATA17Q96L03 361 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 CEP295NLQ96MC4 621 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 TCF25Q9BQ70 676 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 CNPY3Q9BT09 278 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 TUBB2BQ9BVA1 445 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 ENTPD7Q9NQZ7 604 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 MAFFQ9ULX9 164 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 USTQ9Y2C2 406 aa17.69■□□□□ 0.42
ARFGAP1-220ENST00000547204 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 SOAT2O75908 522 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 CXCL14O95715 111 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 ATF2P15336 505 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 DESP17661 470 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 SDC4P31431 198 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 CTNNA1P35221 906 aaKnown RBP17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 DNA2P51530 1060 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 YWHAZP63104 245 aaKnown RBP17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 SMC1AQ14683 1233 aaKnown RBP17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 ACAP1Q15027 740 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 SDHAF4Q5VUM1 108 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 UBL4BQ8N7F7 174 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 SCAMP5Q8TAC9 235 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 POF1BQ8WVV4 589 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 GOLGA1Q92805 767 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 OSBPL9Q96SU4 736 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 TLR9Q9NR96 1032 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 IRAK3Q9Y616 596 aa17.68■□□□□ 0.42
ARFGAP1-220ENST00000547204 CCDC66A2RUB6 948 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 YJEFN3A6XGL0 299 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 E7ENQ6 273 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 DDX3YO15523 660 aaKnown RBP17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 RTN3O95197 1032 aaPredicted RBP17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 LTFP02788 710 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 CNPP09543 421 aaKnown RBP17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 PTPN9P43378 593 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 ERVFC1P60507 584 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 CCDC14Q49A88 953 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 CC2D1AQ6P1N0 951 aaPredicted RBP17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 BHLHA9Q7RTU4 235 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 NECAB3Q96P71 396 aaPredicted RBP17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 SLC2A13Q96QE2 648 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 PSMB7Q99436 277 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 DDX23Q9BUQ8 820 aaKnown RBP17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 TRIM62Q9BVG3 475 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 EMILIN2Q9BXX0 1053 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 FBXO44Q9H4M3 255 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 L2HGDHQ9H9P8 463 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 CYP4F11Q9HBI6 524 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 POPDC2Q9HBU9 364 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 COMMD8Q9NX08 183 aa17.67■□□□□ 0.42
ARFGAP1-220ENST00000547204 CDC23Q9UJX2 597 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms