RNA–Protein interactions for RNA: ENST00000547201.5

USP25-209, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-209ENST00000547201 CDX2Q99626 313 aaPredicted RBP6□□□□□ -1.45
USP25-209ENST00000547201 MSTO1Q9BUK6 570 aa6□□□□□ -1.45
USP25-209ENST00000547201 TIPINQ9BVW5 301 aa6□□□□□ -1.45
USP25-209ENST00000547201 TMEM117Q9H0C3 514 aa6□□□□□ -1.45
USP25-209ENST00000547201 SDCBP2Q9H190 292 aa6□□□□□ -1.45
USP25-209ENST00000547201 NUP62CLQ9H1M0 184 aa6□□□□□ -1.45
USP25-209ENST00000547201 C1orf112Q9NSG2 853 aa6□□□□□ -1.45
USP25-209ENST00000547201 DMAC2Q9NW81 257 aa6□□□□□ -1.45
USP25-209ENST00000547201 SEL1LQ9UBV2 794 aa6□□□□□ -1.45
USP25-209ENST00000547201 HMGXB4Q9UGU5 601 aa6□□□□□ -1.45
USP25-209ENST00000547201 EBF1Q9UH73 591 aa6□□□□□ -1.45
USP25-209ENST00000547201 AGO2Q9UKV8 859 aaKnown RBP6□□□□□ -1.45
USP25-209ENST00000547201 PCDHB7Q9Y5E2 793 aa6□□□□□ -1.45
USP25-209ENST00000547201 TIMM13Q9Y5L4 95 aaPredicted RBP6□□□□□ -1.45
USP25-209ENST00000547201 PTPRDP23468 1912 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 C5orf42Q9H799 3197 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 GOLGA6L4A6NEF3 574 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 CHURC1-FNTBB4DL54 471 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 NRP1O14786 923 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 OGTO15294 1046 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 AP5Z1O43299 807 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 PSPNO60542 156 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 HTR3BO95264 441 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 GLP2RO95838 553 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 RECKO95980 971 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 GALTP07902 379 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 OR4Q2P0C623 313 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 ACTN1P12814 892 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 ZSCAN20P17040 1043 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 HOXA5P20719 270 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 TKTP29401 623 aaKnown RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 BUD31P41223 144 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 MATR3P43243 847 aaKnown RBP eCLIP5.99□□□□□ -1.45
USP25-209ENST00000547201 KLK7P49862 253 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 EFNA5P52803 228 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 ERVK-21P61565 698 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 DLX2Q07687 328 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 CYP24A1Q07973 514 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 STRN3Q13033 797 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 NCAPHQ15003 741 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 ZBTB6Q15916 424 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 KNOP1Q1ED39 458 aaKnown RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 DCAF4L1Q3SXM0 396 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 CBWD6Q4V339 395 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 CBWD3Q5JTY5 395 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 CBWD5Q5RIA9 395 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 LCE5AQ5TCM9 118 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 ZNF658Q5TYW1 1059 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 TDRD10Q5VZ19 366 aaKnown RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 ARMCX5Q6P1M9 558 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 PRSS55Q6UWB4 352 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 CMTR2Q8IYT2 770 aaKnown RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 RNF168Q8IYW5 571 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 LRRC43Q8N309 656 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 DEFB123Q8N688 67 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 SEMA4DQ92854 862 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 KAT5Q92993 513 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 CCDC127Q96BQ5 260 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 RHOVQ96L33 236 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 GBP4Q96PP9 640 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 RAD9AQ99638 391 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 RTP3Q9BQQ7 232 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 PI4K2AQ9BTU6 479 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 FTHL17Q9BXU8 183 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 RHOBTB2Q9BYZ6 727 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 TRIM6Q9C030 488 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 ELAC1Q9H777 363 aaKnown RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 MMRN2Q9H8L6 949 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 C17orf75Q9HAS0 396 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 CHST12Q9NRB3 414 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 SAMSN1Q9NSI8 373 aaKnown RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 MTMR10Q9NXD2 777 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 RBAKQ9NYW8 714 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 USP25Q9UHP3 1055 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 CNOT6Q9ULM6 557 aaKnown RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 POLR3KQ9Y2Y1 108 aaPredicted RBP5.99□□□□□ -1.45
USP25-209ENST00000547201 UBE4BO95155 1302 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 MYO9BQ13459 2157 aa5.99□□□□□ -1.45
USP25-209ENST00000547201 DENND4AQ7Z401 1863 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 BRWD1Q9NSI6 2320 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 NOTCH4Q99466 2003 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 PODXLO00592 558 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 SCAMP3O14828 347 aaKnown RBP5.98□□□□□ -1.45
USP25-209ENST00000547201 PER2O15055 1255 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 CLDN3O15551 220 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 EXTL3O43909 919 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 FGF18O76093 207 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 PARNO95453 639 aaKnown RBP5.98□□□□□ -1.45
USP25-209ENST00000547201 PNMA6AP0CW24 399 aaPredicted RBP5.98□□□□□ -1.45
USP25-209ENST00000547201 DLATP10515 647 aaKnown RBP5.98□□□□□ -1.45
USP25-209ENST00000547201 ATP1A3P13637 1013 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 NR2F2P24468 414 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 AXLP30530 894 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 POLR2BP30876 1174 aaKnown RBP5.98□□□□□ -1.45
USP25-209ENST00000547201 BMPR1AP36894 532 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 OR1G1P47890 313 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 RAB27AP51159 221 aa5.98□□□□□ -1.45
USP25-209ENST00000547201 SNRNP35Q16560 246 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms