RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ALCAMQ13740 583 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 IYDQ6PHW0 289 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 USP50Q70EL3 339 aaPredicted RBP11.12□□□□□ -0.63
NPAS3-205ENST00000547068 FAM83AQ86UY5 434 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 ZNF410Q86VK4 478 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 PASD1Q8IV76 773 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 PDIK1LQ8N165 341 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 TAB3Q8N5C8 712 aaPredicted RBP11.12□□□□□ -0.63
NPAS3-205ENST00000547068 TTC13Q8NBP0 860 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 TRPM4Q8TD43 1214 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 DDI1Q8WTU0 396 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 FAM151AQ8WW52 585 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 RSPH1Q8WYR4 309 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 CNBD2Q96M20 576 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 SLX1AQ9BQ83 275 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 CYP4F11Q9HBI6 524 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 MRPL47Q9HD33 250 aaKnown RBP11.12□□□□□ -0.63
NPAS3-205ENST00000547068 CDH22Q9UJ99 828 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 PCDHGB4Q9UN71 923 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 POMPQ9Y244 141 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 PCDHGB5Q9Y5G0 923 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 AK5Q9Y6K8 562 aa11.12□□□□□ -0.63
NPAS3-205ENST00000547068 ARHGEF35A5YM69 484 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 SDR42E2A6NKP2 422 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 E9PBE3 544 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 H3BSA7 217 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 DKC1O60832 514 aaKnown RBP eCLIP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 ADRB2P07550 413 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 SRGAP2CP0DJJ0 459 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 SRGAP2BP0DMP2 458 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 ZFXP17010 805 aaPredicted RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 HOXA13P31271 388 aaPredicted RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 MLH1P40692 756 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 CD151P48509 253 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 COPAP53621 1224 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 SNAP25P60880 206 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 CDK18Q07002 472 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 MAMLD1Q13495 774 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 KBTBD12Q3ZCT8 623 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 TCHHL1Q5QJ38 904 aaPredicted RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 PGM2L1Q6PCE3 622 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 MON1BQ7L1V2 547 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 NUDCD3Q8IVD9 361 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 C12orf56Q8IXR9 622 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 DAW1Q8N136 415 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 AHI1Q8N157 1196 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 BBS5Q8N3I7 341 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 FBXL13Q8NEE6 735 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 TAS1R2Q8TE23 839 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 SLC44A1Q8WWI5 657 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 ZNF696Q9H7X3 374 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 WRAP73Q9P2S5 460 aaPredicted RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 PI4KBQ9UBF8 816 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 HBS1LQ9Y450 684 aaKnown RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 FOCADQ5VW36 1801 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 E7ESA3 106 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 H3BNX3 289 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 ADCY3O60266 1144 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 CD48P09326 243 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 PORP16435 677 aaPredicted RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 NR1H2P55055 460 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 HDAC4P56524 1084 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 ZYXQ15942 572 aaKnown RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 ANGEL2Q5VTE6 544 aaKnown RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 CES4AQ5XG92 561 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 BORAQ6PGQ7 559 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 PAOXQ6QHF9 649 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 APOBEC3FQ8IUX4 373 aaKnown RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 NAT8LQ8N9F0 302 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 NKD2Q969F2 451 aaPredicted RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 DCPSQ96C86 337 aaKnown RBP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 AMNQ9BXJ7 453 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 RAB26Q9ULW5 256 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 PLLPQ9Y342 182 aa11.11□□□□□ -0.63
NPAS3-205ENST00000547068 SF3B1O75533 1304 aaKnown RBP eCLIP11.11□□□□□ -0.63
NPAS3-205ENST00000547068 CRTAMO95727 393 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 POLR2MP0CAP2 368 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 IDO1P14902 403 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 TCF4P15884 667 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 CDH2P19022 906 aaPredicted RBP11.1□□□□□ -0.63
NPAS3-205ENST00000547068 MYBPC1Q00872 1141 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 TEX44Q53QW1 395 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 SPOCD1Q6ZMY3 1216 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 DENND5BQ6ZUT9 1274 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 HPS6Q86YV9 775 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 CBWD2Q8IUF1 395 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 CROCCP3Q8IVE0 287 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 ACTRT2Q8TDY3 377 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 TMEM8AQ9HCN3 771 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 PFDN4Q9NQP4 134 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 XPO7Q9UIA9 1087 aaKnown RBP11.1□□□□□ -0.63
NPAS3-205ENST00000547068 COQ4Q9Y3A0 265 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 AP4B1Q9Y6B7 739 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 IGLV3-22A0A075B6J6 115 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 MYOCOSA0A1B0GUC4 107 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 TCRBV9S1A1TA0A576 114 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 TRIM49D1C9J1S8 452 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 CYB561D2O14569 222 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 PSMD10O75832 226 aa11.1□□□□□ -0.63
NPAS3-205ENST00000547068 KLHL2O95198 593 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms