RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SIX6OS1Q8N1H7 587 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 SIK2Q9H0K1 926 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 GNEQ9Y223 722 aaKnown RBP13.26□□□□□ -0.29
SCAF11-209ENST00000547018 SNX10Q9Y5X0 201 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 KIAA0100Q14667 2235 aaKnown RBP13.26□□□□□ -0.29
SCAF11-209ENST00000547018 BHMG1C9JSJ3 638 aaPredicted RBP13.26□□□□□ -0.29
SCAF11-209ENST00000547018 FAM155BO75949 473 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 GOT1P17174 413 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 BRCC3P46736 316 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 SULT1E1P49888 294 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 SLC6A3Q01959 620 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 OASLQ15646 514 aaKnown RBP13.26□□□□□ -0.29
SCAF11-209ENST00000547018 HIBCHQ6NVY1 386 aaPredicted RBP13.26□□□□□ -0.29
SCAF11-209ENST00000547018 FAM228AQ86W67 206 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 MAP7D3Q8IWC1 876 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 PDIK1LQ8N165 341 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 FBF1Q8TES7 1133 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 GTF3C2Q8WUA4 911 aaPredicted RBP13.26□□□□□ -0.29
SCAF11-209ENST00000547018 CPT1BQ92523 772 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 TLCD1Q96CP7 247 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 TBCBQ99426 244 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 LGMNQ99538 433 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 MIOSQ9NXC5 875 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 IKBKGQ9Y6K9 419 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 M0QYT0 321 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 RGS2P41220 211 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 GRIA1P42261 906 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 ARPP19P56211 112 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 DNAJC3Q13217 504 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 DPYSL3Q14195 570 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 GDF6Q6KF10 455 aaPredicted RBP13.26□□□□□ -0.29
SCAF11-209ENST00000547018 PPM1NQ8N819 430 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 MCRS1Q96EZ8 462 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 KRT82Q9NSB4 513 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 DDX43Q9NXZ2 648 aaKnown RBP13.26□□□□□ -0.29
SCAF11-209ENST00000547018 SAMD15Q9P1V8 674 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 MYBPHLA2RUH7 354 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 ELK3P41970 407 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 AP1B1Q10567 949 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 OLIG2Q13516 323 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 SYPL2Q5VXT5 272 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 IGDCC3Q8IVU1 814 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 PCDH19Q8TAB3 1148 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 STMN4Q9H169 189 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-209ENST00000547018 AGO3Q9H9G7 860 aaKnown RBP13.25□□□□□ -0.29
SCAF11-209ENST00000547018 C3orf70A6NLC5 250 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-209ENST00000547018 KCNK1O00180 336 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 USP12O75317 370 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 USP17L7P0C7H9 530 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 DESP17661 470 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 CYP2F1P24903 491 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 HDAC4P56524 1084 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 SPARCL1Q14515 664 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 CES3Q6UWW8 571 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 BBS12Q6ZW61 710 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 KDELC2Q7Z4H8 507 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 APBB1IPQ7Z5R6 666 aaPredicted RBP13.25□□□□□ -0.29
SCAF11-209ENST00000547018 RASAL3Q86YV0 1011 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 SLC7A14Q8TBB6 771 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 PGM2Q96G03 612 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 NFKBIZQ9BYH8 718 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 RSAD1Q9HA92 442 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 TRMT13Q9NUP7 481 aaKnown RBP13.25□□□□□ -0.29
SCAF11-209ENST00000547018 AP4E1Q9UPM8 1137 aa13.25□□□□□ -0.29
SCAF11-209ENST00000547018 APOL1O14791 398 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 CDH5P33151 784 aaPredicted RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 RDXP35241 583 aaKnown RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 SLC8A3P57103 927 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 SESN2P58004 480 aaPredicted RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 RGMBQ6NW40 437 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 ZCCHC9Q8N567 271 aaKnown RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 SMG8Q8ND04 991 aaKnown RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 BBOF1Q8ND07 529 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 ATXN7L3BQ96GX2 97 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 TGS1Q96RS0 853 aaKnown RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 TSPYL2Q9H2G4 693 aaPredicted RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 TRABDQ9H4I3 376 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 ZFYVE28Q9HCC9 887 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 SLCO1B3Q9NPD5 702 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 SMIM35A0A1B0GVV1 85 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 CDH16O75309 829 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 KRT4P19013 534 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 ARL4CP56559 192 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 ENPEPQ07075 957 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 RNASEH2BQ5TBB1 312 aaKnown RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 SDHAF4Q5VUM1 108 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 PLD5Q8N7P1 536 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 B3GALNT2Q8NCR0 500 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 TRPV1Q8NER1 839 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 SLC35B2Q8TB61 432 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 KBTBD7Q8WVZ9 684 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 SENP8Q96LD8 212 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 APOL2Q9BQE5 337 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 FAM129AQ9BZQ8 928 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 PCDH18Q9HCL0 1135 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 A0A087WUV0 522 aaPredicted RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 RBM47A0AV96 593 aaKnown RBP13.24□□□□□ -0.29
SCAF11-209ENST00000547018 AP1G2O75843 785 aa13.24□□□□□ -0.29
SCAF11-209ENST00000547018 CSPG5O95196 566 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms