RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 SCP2P22307 547 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 UQCRC1P31930 480 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 MLC1Q15049 377 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 NFE2Q16621 373 aaPredicted RBP5.1□□□□□ -1.59
CCDC38-204ENST00000546816 ODR4Q5SWX8 454 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 DLK2Q6UY11 383 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 SFTPA1Q8IWL2 248 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 SPARTQ8N0X7 666 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 PNISRQ8TF01 805 aaKnown RBP5.1□□□□□ -1.59
CCDC38-204ENST00000546816 SPSB4Q96A44 273 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 TRIM43Q96BQ3 446 aaPredicted RBP5.1□□□□□ -1.59
CCDC38-204ENST00000546816 NMD3Q96D46 503 aaKnown RBP5.1□□□□□ -1.59
CCDC38-204ENST00000546816 SUCLG2Q96I99 432 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 FYTTD1Q96QD9 318 aaKnown RBP5.1□□□□□ -1.59
CCDC38-204ENST00000546816 SIGLEC11Q96RL6 698 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 FOXP1Q9H334 677 aaPredicted RBP5.1□□□□□ -1.59
CCDC38-204ENST00000546816 LPAR3Q9UBY5 353 aa5.1□□□□□ -1.59
CCDC38-204ENST00000546816 CFAP69A5D8W1 941 aa5.09□□□□□ -1.59
CCDC38-204ENST00000546816 MBD3L4A6NDZ8 208 aaPredicted RBP5.09□□□□□ -1.59
CCDC38-204ENST00000546816 MBD3L3A6NE82 208 aaPredicted RBP5.09□□□□□ -1.59
CCDC38-204ENST00000546816 FAM227AF5H4B4 570 aa5.09□□□□□ -1.59
CCDC38-204ENST00000546816 PYCARD-AS1I3L0S3 204 aa5.09□□□□□ -1.59
CCDC38-204ENST00000546816 PLEKHG6Q3KR16 790 aa5.09□□□□□ -1.59
CCDC38-204ENST00000546816 MINDY4Q4G0A6 757 aa5.09□□□□□ -1.59
CCDC38-204ENST00000546816 CHPFQ8IZ52 775 aa5.09□□□□□ -1.59
CCDC38-204ENST00000546816 LYZL4Q96KX0 146 aa5.09□□□□□ -1.59
CCDC38-204ENST00000546816 MMS19Q96T76 1030 aa5.09□□□□□ -1.59
CCDC38-204ENST00000546816 SACM1LQ9NTJ5 587 aa5.09□□□□□ -1.59
CCDC38-204ENST00000546816 TFCP2L1Q9NZI6 479 aa5.09□□□□□ -1.59
CCDC38-204ENST00000546816 ISM1B1AKI9 464 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 PSMD9O00233 223 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 CES2O00748 559 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 FRS3O43559 492 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 SRGAP2O75044 1071 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 SCGB1D2O95969 90 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 TOMM40O96008 361 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 U2AF1L5P0DN76 240 aaPredicted RBP5.08□□□□□ -1.6
CCDC38-204ENST00000546816 THBS4P35443 961 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 TIRAPP58753 221 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 U2AF1Q01081 240 aaKnown RBP eCLIP5.08□□□□□ -1.6
CCDC38-204ENST00000546816 LMAN2Q12907 356 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 ERV3-1Q14264 604 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 NPY5RQ15761 445 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 NXNQ6DKJ4 435 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 DEF8Q6ZN54 512 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 TCEAL8Q8IYN2 117 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 MAP4K1Q92918 833 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 ZBTB45Q96K62 511 aaPredicted RBP5.08□□□□□ -1.6
CCDC38-204ENST00000546816 PPP1R9BQ96SB3 815 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 VN1R3Q9BXE9 311 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 C1orf112Q9NSG2 853 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 USP22Q9UPT9 525 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 PAXBP1Q9Y5B6 917 aa5.08□□□□□ -1.6
CCDC38-204ENST00000546816 ZMYM2Q9UBW7 1377 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 LOC102723971A0A1B0GUV8 181 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 FAM90A8PA6NJQ4 464 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 H7C4K7 107 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 CD3EAPO15446 510 aaKnown RBP5.07□□□□□ -1.6
CCDC38-204ENST00000546816 CCP110O43303 1012 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 SPRY2O43597 315 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 MT-CO3P00414 261 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 FAM90A13PP0C7W8 464 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 FAM90A24PP0C7X0 464 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 BRAFP15056 766 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 EPHA3P29320 983 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 PRKAR1BP31321 381 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 HTR6P50406 440 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 SUMO2P61956 95 aaKnown RBP5.07□□□□□ -1.6
CCDC38-204ENST00000546816 TIAL1Q01085 375 aaKnown RBP eCLIP5.07□□□□□ -1.6
CCDC38-204ENST00000546816 FMO1Q01740 532 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 CNGA2Q16280 664 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 INSCQ1MX18 579 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 ZNF750Q32MQ0 723 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 C3orf38Q5JPI3 329 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 CACHD1Q5VU97 1274 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 PTCHD4Q6ZW05 846 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 RAB11FIP4Q86YS3 637 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 MAGEB6Q8N7X4 407 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 ACRBPQ8NEB7 543 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 OSR1Q8TAX0 266 aaPredicted RBP5.07□□□□□ -1.6
CCDC38-204ENST00000546816 COL20A1Q9P218 1284 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 TPCN1Q9ULQ1 816 aa5.07□□□□□ -1.6
CCDC38-204ENST00000546816 TTC3P53804 2025 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 M0R3H8 397 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 AGPSO00116 658 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 RRP9O43818 475 aaKnown RBP5.06□□□□□ -1.6
CCDC38-204ENST00000546816 MARCH6O60337 910 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 TLR2O60603 784 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 CNOT3O75175 753 aaKnown RBP5.06□□□□□ -1.6
CCDC38-204ENST00000546816 RASAL1O95294 804 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 APEHP13798 732 aaKnown RBP5.06□□□□□ -1.6
CCDC38-204ENST00000546816 ATF7P17544 494 aaPredicted RBP5.06□□□□□ -1.6
CCDC38-204ENST00000546816 KLRC1P26715 233 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 RGS19P49795 217 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 DIO1P49895 249 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 AWAT1Q58HT5 328 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 LINC01465Q8N7H1 131 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 RBMXL3Q8N7X1 1067 aaKnown RBP5.06□□□□□ -1.6
CCDC38-204ENST00000546816 WDYHV1Q96HA8 205 aa5.06□□□□□ -1.6
CCDC38-204ENST00000546816 CCDC17Q96LX7 622 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms