RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SHROOM3Q8TF72 1996 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 MYO18BQ8IUG5 2567 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 A0A1B0GTW7 788 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 E2F8A0AVK6 867 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 VWA3AA6NCI4 1184 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 PRRT4C9JH25 899 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 TK2O00142 265 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 NDUFS2O75306 463 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 ZNF883P0CG24 379 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 GNSP15586 552 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 ANXA13P27216 316 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 ABCG1P45844 678 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 NOP14P78316 857 aaKnown RBP10.01□□□□□ -0.81
CHD4-212ENST00000545083 CYP27A1Q02318 531 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 KCNA1Q09470 495 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 MCM6Q14566 821 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 WDR45BQ5MNZ6 344 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 SYCP2LQ5T4T6 812 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 LARP1BQ659C4 914 aaKnown RBP10.01□□□□□ -0.81
CHD4-212ENST00000545083 DBX2Q6ZNG2 339 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 CHPFQ8IZ52 775 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 ZNF843Q8N446 348 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 CSGALNACT2Q8N6G5 542 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 POMGNT1Q8WZA1 660 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 SAAL1Q96ER3 474 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 TOE1Q96GM8 510 aaKnown RBP10.01□□□□□ -0.81
CHD4-212ENST00000545083 PCED1BQ96HM7 432 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 CEP295NLQ96MC4 621 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 GABRG3Q99928 467 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 FAM213AQ9BRX8 229 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 PRORYQ9H606 182 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 SPHK2Q9NRA0 654 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 TBC1D14Q9P2M4 693 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 CDH9Q9ULB4 789 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 RAI2Q9Y5P3 530 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 SLCO1B1Q9Y6L6 691 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 SPTA1P02549 2419 aa10.01□□□□□ -0.81
CHD4-212ENST00000545083 MEI4A8MW99 385 aa10□□□□□ -0.81
CHD4-212ENST00000545083 KCNJ18B7U540 433 aa10□□□□□ -0.81
CHD4-212ENST00000545083 WASH3PC4AMC7 463 aa10□□□□□ -0.81
CHD4-212ENST00000545083 COCHO43405 550 aa10□□□□□ -0.81
CHD4-212ENST00000545083 PPP1R37O75864 691 aa10□□□□□ -0.81
CHD4-212ENST00000545083 KRT19P08727 400 aa10□□□□□ -0.81
CHD4-212ENST00000545083 PDGFRBP09619 1106 aa10□□□□□ -0.81
CHD4-212ENST00000545083 NCAM1P13591 858 aa10□□□□□ -0.81
CHD4-212ENST00000545083 CD6P30203 668 aa10□□□□□ -0.81
CHD4-212ENST00000545083 MATKP42679 507 aa10□□□□□ -0.81
CHD4-212ENST00000545083 PPP3CCP48454 512 aa10□□□□□ -0.81
CHD4-212ENST00000545083 IFRD2Q12894 506 aaPredicted RBP10□□□□□ -0.81
CHD4-212ENST00000545083 MYO1EQ12965 1108 aa10□□□□□ -0.81
CHD4-212ENST00000545083 HLA-BQ31612 363 aa10□□□□□ -0.81
CHD4-212ENST00000545083 ANO4Q32M45 955 aa10□□□□□ -0.81
CHD4-212ENST00000545083 MDH1BQ5I0G3 518 aa10□□□□□ -0.81
CHD4-212ENST00000545083 BTBD8Q5XKL5 378 aa10□□□□□ -0.81
CHD4-212ENST00000545083 GRAMD4Q6IC98 578 aa10□□□□□ -0.81
CHD4-212ENST00000545083 KIAA1324Q6UXG2 1013 aaKnown RBP10□□□□□ -0.81
CHD4-212ENST00000545083 DDX42Q86XP3 938 aaKnown RBP eCLIP10□□□□□ -0.81
CHD4-212ENST00000545083 RHBDD1Q8TEB9 315 aa10□□□□□ -0.81
CHD4-212ENST00000545083 FOXJ1Q92949 421 aa10□□□□□ -0.81
CHD4-212ENST00000545083 OTUB2Q96DC9 234 aa10□□□□□ -0.81
CHD4-212ENST00000545083 C8orf48Q96LL4 319 aa10□□□□□ -0.81
CHD4-212ENST00000545083 GPR174Q9BXC1 333 aa10□□□□□ -0.81
CHD4-212ENST00000545083 MTMR12Q9C0I1 747 aa10□□□□□ -0.81
CHD4-212ENST00000545083 MIR1-1HGQ9H1L0 117 aa10□□□□□ -0.81
CHD4-212ENST00000545083 ST6GALNAC4Q9H4F1 302 aa10□□□□□ -0.81
CHD4-212ENST00000545083 DNAJC17Q9NVM6 304 aaKnown RBP10□□□□□ -0.81
CHD4-212ENST00000545083 WSB2Q9NYS7 404 aaPredicted RBP10□□□□□ -0.81
CHD4-212ENST00000545083 ITGA11Q9UKX5 1188 aa10□□□□□ -0.81
CHD4-212ENST00000545083 PTPRJQ12913 1337 aa10□□□□□ -0.81
CHD4-212ENST00000545083 MGAQ8IWI9 3026 aa10□□□□□ -0.81
CHD4-212ENST00000545083 GOLGA8IPA6NC78 632 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 GOLGA8JA6NMD2 632 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 TRIM66O15016 1216 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 FLRT2O43155 660 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 ZBTB24O43167 697 aaPredicted RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 TLX3O43711 291 aaPredicted RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 TBCAO75347 108 aaKnown RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 CER1O95813 267 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 KRT18P05783 430 aaKnown RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 IRF1P10914 325 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 WARSP23381 471 aaKnown RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 CLDN6P56747 220 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 RBP5P82980 135 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 SMAD1Q15797 465 aaKnown RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 PTPRNQ16849 979 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 CCDC157Q569K6 752 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 ZNF720Q7Z2F6 126 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 ZNF605Q86T29 641 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 GALNT15Q8N3T1 639 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 PDCD7Q8N8D1 485 aaKnown RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 C1orf216Q8TAB5 229 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 MYCBPAPQ8TBZ2 947 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 CACTINQ8WUQ7 758 aaKnown RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 RAD54LQ92698 747 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 P2RY11Q96G91 374 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 CDC6Q99741 560 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 MRPL45Q9BRJ2 306 aaKnown RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 LLPHQ9BRT6 129 aaKnown RBP9.99□□□□□ -0.81
CHD4-212ENST00000545083 STRA6Q9BX79 667 aa9.99□□□□□ -0.81
CHD4-212ENST00000545083 ZNF518BQ9C0D4 1074 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms