RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 MAPKAPK2P49137 400 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 PRKAG3Q9UGI9 489 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 CNOT3O75175 753 aaKnown RBP20.66■□□□□ 0.9
BPTF-208ENST00000544778 VTNP04004 478 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 SERPINB8P50452 374 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 CYP24A1Q07973 514 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 CCT8L2Q96SF2 557 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 ZNF70Q9UC06 446 aaPredicted RBP20.66■□□□□ 0.9
BPTF-208ENST00000544778 KDM6AO15550 1401 aaPredicted RBP20.66■□□□□ 0.9
BPTF-208ENST00000544778 IFNA14P01570 189 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 RCN1Q15293 331 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 INAQ16352 499 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 PCDHB2Q9Y5E7 798 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 KLK7P49862 253 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 LPIN1Q14693 890 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 ACOX1Q15067 660 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 TCEA2Q15560 299 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 CYP20A1Q6UW02 462 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 CRTAMO95727 393 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 NDUFB10O96000 172 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 EPHA10Q5JZY3 1008 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 ATAD3BQ5T9A4 648 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.66■□□□□ 0.9
BPTF-208ENST00000544778 ACOT1Q86TX2 421 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 CACTIN-AS1Q8N1I8 211 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 FAM111AQ96PZ2 611 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 KCTD14Q9BQ13 255 aaPredicted RBP20.66■□□□□ 0.9
BPTF-208ENST00000544778 PACSIN1Q9BY11 444 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 NIF3L1Q9GZT8 377 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 NT5MQ9NPB1 228 aa20.66■□□□□ 0.9
BPTF-208ENST00000544778 THG1LQ9NWX6 298 aaKnown RBP20.66■□□□□ 0.9
BPTF-208ENST00000544778 HMGB3O15347 200 aaKnown RBP20.65■□□□□ 0.9
BPTF-208ENST00000544778 SGSM3Q96HU1 749 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 RHBDL2Q9NX52 303 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 PRR12Q9ULL5 1215 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 LBPP18428 481 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 OVGP1Q12889 678 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 KBTBD12Q3ZCT8 623 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 FAM220BPB1ANY3 271 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 PSMD14O00487 310 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 RAP1GAPP47736 663 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 MB21D2Q8IYB1 491 aaPredicted RBP20.65■□□□□ 0.9
BPTF-208ENST00000544778 RUBCNQ92622 972 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 FLT1P17948 1338 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 ATP7BP35670 1465 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 TRIM49D1C9J1S8 452 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 CCNT2O60583 730 aaKnown RBP20.65■□□□□ 0.9
BPTF-208ENST00000544778 KRT33AO76009 404 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 AMPD2Q01433 879 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 NEUROD4Q9HD90 331 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 AGPAT5Q9NUQ2 364 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 AKAP7Q9P0M2 348 aaPredicted RBP20.65■□□□□ 0.9
BPTF-208ENST00000544778 SLC12A8A0AV02 714 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 GSSP48637 474 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 TMED8Q6PL24 325 aaPredicted RBP20.65■□□□□ 0.9
BPTF-208ENST00000544778 CBWD2Q8IUF1 395 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 ADGRF2Q8IZF7 708 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 MTMR4Q9NYA4 1195 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 SNX13Q9Y5W8 968 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 KLRC2P26717 231 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 PDZK1Q5T2W1 519 aa20.65■□□□□ 0.9
BPTF-208ENST00000544778 GJB7Q6PEY0 223 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 DOK6Q6PKX4 331 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 SMIM5Q71RC9 77 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 SLFN11Q7Z7L1 901 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 FAM84BQ96KN1 310 aaPredicted RBP20.64■□□□□ 0.9
BPTF-208ENST00000544778 KLHL25Q9H0H3 589 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 WDR19Q8NEZ3 1342 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 KLHL17Q6TDP4 642 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 BRINP3Q76B58 766 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 MXRA8Q9BRK3 442 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 MYOZ2Q9NPC6 264 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 KLHL28Q9NXS3 571 aa20.64■□□□□ 0.9
BPTF-208ENST00000544778 CLASP1Q7Z460 1538 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 IQCMA0A1B0GVH7 501 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 ITGALP20701 1170 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 RBBP4Q09028 425 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 STRIP1Q5VSL9 837 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 LRIG3Q6UXM1 1119 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 RNF44Q7L0R7 432 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 ELOVL6Q9H5J4 265 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 PTPRHQ9HD43 1115 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 PBRM1Q86U86 1689 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 CSGALNACT1Q8TDX6 532 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 CCDC126Q96EE4 140 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 DTNBP1Q96EV8 351 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 UBE2OQ9C0C9 1292 aaKnown RBP20.64■□□□□ 0.89
BPTF-208ENST00000544778 AXIN2Q9Y2T1 843 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 RAD51CO43502 376 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 ZNF543Q08ER8 600 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 CRYMQ14894 314 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 ZNF57Q68EA5 555 aaPredicted RBP20.64■□□□□ 0.89
BPTF-208ENST00000544778 DDHD1Q8NEL9 900 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 NEDD1Q8NHV4 660 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 SLC20A1Q8WUM9 679 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 TRPM5Q9NZQ8 1165 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 DDR2Q16832 855 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 FICDQ9BVA6 458 aa20.64■□□□□ 0.89
BPTF-208ENST00000544778 TARS2Q9BW92 718 aaKnown RBP20.64■□□□□ 0.89
BPTF-208ENST00000544778 OXCT2Q9BYC2 517 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms