RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ADPGKQ9BRR6 497 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 GTPBP2Q9BX10 602 aaKnown RBP4.47□□□□□ -1.69
SNHG1-220ENST00000544550 C22orf23Q9BZE7 217 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ZMYND12Q9H0C1 365 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 GMIPQ9P107 970 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 RCAN3Q9UKA8 241 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 AP4E1Q9UPM8 1137 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ASB3Q9Y575 518 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ACTL7BQ9Y614 415 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 NCANO14594 1321 aa4.46□□□□□ -1.69
SNHG1-220ENST00000544550 ANKRD11Q6UB99 2663 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 PTGESO14684 152 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 N4BP3O15049 544 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 RRP8O43159 456 aaKnown RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 AP5Z1O43299 807 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 MARCH6O60337 910 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 RECQL4O94761 1208 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 EGFP01133 1207 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CFIP05156 583 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 SERPINF2P08697 491 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 GJA1P17302 382 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 NOS3P29474 1203 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CDC25CP30307 473 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 ALDH1A3P47895 512 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 PREPP48147 710 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CLCNKBP51801 687 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 TNK2Q07912 1038 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 EMC2Q15006 297 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 PDGFRLQ15198 375 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 UPP1Q16831 310 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 PFKFB3Q16875 520 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 Q4G0T1 1027 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CTXN3Q4LDR2 81 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CDCP2Q5VXM1 449 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 SLC6A19Q695T7 634 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 MCTP1Q6DN14 999 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 OVOS1Q6IE37 1185 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 ANO7Q6IWH7 933 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CC2D1AQ6P1N0 951 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 DYMQ7RTS9 669 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 TMPRSS7Q7RTY8 843 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 APBB1IPQ7Z5R6 666 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 GLRX5Q86SX6 157 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 ITIH5Q86UX2 942 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 SGMS1Q86VZ5 419 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 HID1Q8IV36 788 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 MCATQ8IVS2 390 aaKnown RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 NAXDQ8IW45 347 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 MRPL41Q8IXM3 137 aaKnown RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 C4orf19Q8IY42 314 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 MINDY1Q8N5J2 469 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 C19orf47Q8N9M1 422 aaKnown RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 KCT2Q8NC54 265 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 APPL2Q8NEU8 664 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CCDC148Q8NFR7 591 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 WFDC12Q8WWY7 111 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CD101Q93033 1021 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 RSPRY1Q96DX4 576 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 WBP1Q96G27 269 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 FAM46AQ96IP4 442 aaKnown RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 TBC1D32Q96NH3 1257 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 GCNAQ96QF7 691 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 TM9SF2Q99805 663 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CEP41Q9BYV8 373 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 TPSD1Q9BZJ3 242 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 TASP1Q9H6P5 420 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 FBRSQ9HAH7 460 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 KIF9Q9HAQ2 790 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 SLC38A7Q9NVC3 462 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 PRMT7Q9NVM4 692 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 SNTG2Q9NY99 539 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CEP72Q9P209 647 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 CACNG4Q9UBN1 327 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 TJP2Q9UDY2 1190 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 MBD1Q9UIS9 605 aaPredicted RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 FBXL5Q9UKA1 691 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 YIPF1Q9Y548 306 aa4.46□□□□□ -1.7
SNHG1-220ENST00000544550 ASH1LQ9NR48 2969 aaKnown RBP4.46□□□□□ -1.7
SNHG1-220ENST00000544550 FRYQ5TBA9 3013 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.45□□□□□ -1.7
SNHG1-220ENST00000544550 CCDC196A0A1B0GTZ2 297 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 A0A1W2PQD8 194 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 TNFRSF10CO14798 259 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 TBX3O15119 743 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 SH3BP5O60239 455 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 SEC24AO95486 1093 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 CD59P13987 128 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 NME1P15531 152 aaKnown RBP4.45□□□□□ -1.7
SNHG1-220ENST00000544550 BCKDHBP21953 392 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 GUCY2CP25092 1073 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 DDX6P26196 483 aaKnown RBP eCLIP4.45□□□□□ -1.7
SNHG1-220ENST00000544550 YWHABP31946 246 aaKnown RBP4.45□□□□□ -1.7
SNHG1-220ENST00000544550 AVPR1AP37288 418 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 ASPAP45381 313 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 GALK1P51570 392 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 RCAN1P53805 252 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 NPEPPSP55786 919 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 FAM193AP78312 1265 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 CYP4F3Q08477 520 aa4.45□□□□□ -1.7
SNHG1-220ENST00000544550 BFSP1Q12934 665 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms