RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	GJA4	P35212	333 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	ATP5C1	P36542	298 aa	Known RBP	13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	NRL	P54845	237 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	CSTF1	Q05048	431 aa	Known RBP	13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	BST2	Q10589	180 aa	Known RBP	13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	MTAP	Q13126	283 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	FZD5	Q13467	585 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	DPCR1	Q3MIW9	517 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	TXNDC11	Q6PKC3	985 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	GBP6	Q6ZN66	633 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	GPRIN1	Q7Z2K8	1008 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	ALYREF	Q86V81	257 aa	Known RBP	13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	CCDC26	Q8TAB7	109 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	OTUB2	Q96DC9	234 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	P2RY13	Q9BPV8	354 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	SEMA4A	Q9H3S1	761 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	LRRC4	Q9HBW1	653 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	CYLD	Q9NQC7	956 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	NAGPA	Q9UK23	515 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	LSM7	Q9UK45	103 aa	Known RBP	13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	TSPAN16	Q9UKR8	245 aa		13.31	□□□□□ -0.28
CLPB-213	ENST00000544382	GTPBP10	A4D1E9	387 aa	Known RBP	13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	PROB1	E7EW31	1015 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	TRDMT1	O14717	391 aa	Known RBP	13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	RARG	P13631	454 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	KRT5	P13647	590 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	CXCL12	P48061	93 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	MFAP3	P55082	362 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	FBXO43	Q4G163	708 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	TMEM196	Q5HYL7	178 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	C10orf120	Q5SQS8	335 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	KLHDC10	Q6PID8	442 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	MAMSTR	Q6ZN01	415 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	RRAGA	Q7L523	313 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	PIGZ	Q86VD9	579 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	SPEM1	Q8N4L4	309 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	UBR7	Q8N806	425 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	LMO3	Q8TAP4	145 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	CD101	Q93033	1021 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	NKD2	Q969F2	451 aa	Predicted RBP	13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	FAM126A	Q9BYI3	521 aa	Predicted RBP	13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	PRMT8	Q9NR22	394 aa	Predicted RBP	13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	CLIC5	Q9NZA1	410 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	DNMT3L	Q9UJW3	386 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	USP3	Q9Y6I4	520 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382	FANCM	Q8IYD8	2048 aa		13.3	□□□□□ -0.28
CLPB-213	ENST00000544382		A0A1W2PQH9	124 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	OTOL1	A6NHN0	477 aa	Predicted RBP	13.29	□□□□□ -0.28
CLPB-213	ENST00000544382		O00370	1275 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	ATG13	O75143	517 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	IRF1	P10914	325 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	ZXDB	P98169	803 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	PDE4C	Q08493	712 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	CCIN	Q13939	588 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	MAN2A1	Q16706	1144 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	EXOC3L4	Q17RC7	722 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	PREPL	Q4J6C6	727 aa	Predicted RBP	13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	RAB41	Q5JT25	222 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	SASS6	Q6UVJ0	657 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	LCLAT1	Q6UWP7	414 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	RSRC2	Q7L4I2	434 aa	Known RBP	13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	TTC30A	Q86WT1	665 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	ARHGEF19	Q8IW93	802 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	SIX6OS1	Q8N1H7	587 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	ATRIP	Q8WXE1	791 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	PHOX2B	Q99453	314 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	LINC00597	Q9H2U6	94 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	RBM12	Q9NTZ6	932 aa	Known RBP	13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	STRIP2	Q9ULQ0	834 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	PCDHGA2	Q9Y5H1	932 aa		13.29	□□□□□ -0.28
CLPB-213	ENST00000544382	ATG2B	Q96BY7	2078 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	MYOF	Q9NZM1	2061 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.28	□□□□□ -0.28
CLPB-213	ENST00000544382		M0QYV0	167 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	PES1	O00541	588 aa	Known RBP	13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	MED7	O43513	233 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	GFRA3	O60609	400 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	ZBED1	O96006	694 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	TPM2	P07951	284 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	ADH5	P11766	374 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	PLA2G4A	P47712	749 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	TKTL1	P51854	596 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	DHCR24	Q15392	516 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	CNGA2	Q16280	664 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	BTBD8	Q5XKL5	378 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	SMYD5	Q6GMV2	418 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	TRIM65	Q6PJ69	517 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	ZNF276	Q8N554	614 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	GPT2	Q8TD30	523 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	KAT5	Q92993	513 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	ZFR	Q96KR1	1074 aa	Known RBP	13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	CRACR2A	Q9BSW2	395 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	OLA1	Q9NTK5	396 aa	Known RBP	13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	ZSCAN32	Q9NX65	697 aa		13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
CLPB-213	ENST00000544382	TBX18	O95935	607 aa		13.27	□□□□□ -0.29

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