RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 SNX8Q9Y5X2 465 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 PNPLA6Q8IY17 1366 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 PNMA8CA0A1B0GUJ8 204 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 LRRC14BA6NHZ5 514 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 POLRMTO00411 1230 aaKnown RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 OR6A2O95222 327 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 FGRP09769 529 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 NQO1P15559 274 aaKnown RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 PCSK1P29120 753 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 BCAP31P51572 246 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 CACNB3P54284 484 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 PTGISQ16647 500 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 CCNI2Q6ZMN8 369 aaPredicted RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 CAMKK1Q8N5S9 505 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 EMILIN2Q9BXX0 1053 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 TRIT1Q9H3H1 467 aaKnown RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 FAM49BQ9NUQ9 324 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 GPRC5DQ9NZD1 345 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 COMMD9Q9P000 198 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 ERN1O75460 977 aaKnown RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 UPP2O95045 317 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 ZCCHC18P0CG32 403 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 MZT2AQ6P582 158 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 NECAB2Q7Z6G3 386 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 FAM118BQ9BPY3 351 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 NLNQ9BYT8 704 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 MIEF1Q9NQG6 463 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 TAGLN3Q9UI15 199 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 WDR19Q8NEZ3 1342 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 DCCP43146 1447 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 TM9SF1O15321 606 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 RAD51CO43502 376 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 RPS6KA4O75676 772 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 PARNO95453 639 aaKnown RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 TXNP10599 105 aaKnown RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 IER5Q5VY09 327 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 KIAA0408Q6ZU52 694 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 PROSER1Q86XN7 944 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 COL23A1Q86Y22 540 aaPredicted RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 FAM111AQ96PZ2 611 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 HEY2Q9UBP5 337 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 ENO2P09104 434 aaPredicted RBP10.72□□□□□ -0.69
PCDH9-204ENST00000544246 FAM58BPP0C7Q3 252 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 ADRA2BP18089 450 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 RBBP4Q09028 425 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 KCNB1Q14721 858 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 PROSER3Q2NL68 480 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 CCDC144BQ3MJ40 725 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 GATAD2AQ86YP4 633 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 TBC1D10CQ8IV04 446 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 EID3Q8N140 333 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 MAGEB18Q96M61 343 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 MAP10Q9P2G4 905 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 NAGPAQ9UK23 515 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 SPATA31E1Q6ZUB1 1445 aa10.72□□□□□ -0.69
PCDH9-204ENST00000544246 PHGDHO43175 533 aaKnown RBP10.71□□□□□ -0.69
PCDH9-204ENST00000544246 NCAM1P13591 858 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 SLC11A2P49281 568 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 ARF5P84085 180 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 CBFBQ13951 182 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 FAM98BQ52LJ0 330 aaKnown RBP10.71□□□□□ -0.69
PCDH9-204ENST00000544246 PRMT9Q6P2P2 845 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 ZBTB49Q6ZSB9 765 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 RIN2Q8WYP3 895 aaPredicted RBP10.71□□□□□ -0.69
PCDH9-204ENST00000544246 USP7Q93009 1102 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 STRBPQ96SI9 672 aaKnown RBP10.71□□□□□ -0.69
PCDH9-204ENST00000544246 AAR2Q9Y312 384 aaKnown RBP10.71□□□□□ -0.69
PCDH9-204ENST00000544246 C1orf232A0A0U1RR37 186 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 ECE2O60344 883 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 RNASEH1O60930 286 aaKnown RBP10.71□□□□□ -0.69
PCDH9-204ENST00000544246 ACOT2P49753 483 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 RHAGQ02094 409 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 SLC15A2Q16348 729 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 ZNF284Q2VY69 593 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 SEL1L3Q68CR1 1132 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 CYB5R4Q7L1T6 521 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 NFKBIZQ9BYH8 718 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 CD248Q9HCU0 757 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 PCDHB7Q9Y5E2 793 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 PRR23AA6NEV1 266 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 PIK3CDO00329 1044 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 CST8O60676 142 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 ASS1P00966 412 aaKnown RBP10.71□□□□□ -0.69
PCDH9-204ENST00000544246 SLC2A3P11169 496 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 HNRNPH1P31943 449 aaKnown RBP10.71□□□□□ -0.69
PCDH9-204ENST00000544246 FMO5P49326 533 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 LGALS3BPQ08380 585 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 OVGP1Q12889 678 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 TBCELQ5QJ74 424 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 MZT2BQ6NZ67 158 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 DENND5BQ6ZUT9 1274 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 MOV10L1Q9BXT6 1211 aaKnown RBP10.71□□□□□ -0.69
PCDH9-204ENST00000544246 FRMD8P1Q9BZ68 369 aaPredicted RBP10.71□□□□□ -0.69
PCDH9-204ENST00000544246 ISCUQ9H1K1 167 aa10.71□□□□□ -0.69
PCDH9-204ENST00000544246 PP2D1A8MPX8 630 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 CD2BP2O95400 341 aaKnown RBP10.71□□□□□ -0.7
PCDH9-204ENST00000544246 TDP2O95551 362 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 CTSHP09668 335 aa10.71□□□□□ -0.7
PCDH9-204ENST00000544246 VAV1P15498 845 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms