RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 SGK1O00141 431 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 BANF1O75531 89 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 SOAT2O75908 522 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 KRT7P08729 469 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 SELPP16109 830 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 HSPA9P38646 679 aaKnown RBP14.3□□□□□ -0.12
HCFC2-202ENST00000544223 CDK7P50613 346 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 RAB27AP51159 221 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 GRIK3Q13003 919 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 CCNG2Q16589 344 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 P3H1Q32P28 736 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 CEP85LQ5SZL2 805 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 LRRC38Q5VT99 294 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 GLB1LQ6UWU2 654 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 TMEM173Q86WV6 379 aaPredicted RBP14.3□□□□□ -0.12
HCFC2-202ENST00000544223 RUBCNQ92622 972 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 TSEN34Q9BSV6 310 aaKnown RBP14.3□□□□□ -0.12
HCFC2-202ENST00000544223 DHX35Q9H5Z1 703 aaKnown RBP14.3□□□□□ -0.12
HCFC2-202ENST00000544223 VIPAS39Q9H9C1 493 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.3□□□□□ -0.12
HCFC2-202ENST00000544223 NEU2Q9Y3R4 380 aa14.3□□□□□ -0.12
HCFC2-202ENST00000544223 CHD9Q3L8U1 2897 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 FOXO6A8MYZ6 492 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 F5H423 210 aaPredicted RBP14.29□□□□□ -0.12
HCFC2-202ENST00000544223 XPO1O14980 1071 aaKnown RBP14.29□□□□□ -0.12
HCFC2-202ENST00000544223 FYNP06241 537 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 CYP2F1P24903 491 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 GPR15P49685 360 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 KRT81Q14533 505 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 OTUD1Q5VV17 481 aaPredicted RBP14.29□□□□□ -0.12
HCFC2-202ENST00000544223 OVOS1Q6IE37 1185 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 UNC45BQ8IWX7 931 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 CMASQ8NFW8 434 aaPredicted RBP14.29□□□□□ -0.12
HCFC2-202ENST00000544223 PGBD4Q96DM1 585 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 LRRC4Q9HBW1 653 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 ANLNQ9NQW6 1124 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 AAASQ9NRG9 546 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 TSC2P49815 1807 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 DCDC2CA8MYV0 355 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 ENPP3O14638 875 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 ODC1P11926 461 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 AARSP49588 968 aaKnown RBP eCLIP14.29□□□□□ -0.12
HCFC2-202ENST00000544223 ARSEP51690 589 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 ARPP19P56211 112 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 NOMO2Q5JPE7 1267 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 FAM117BQ6P1L5 589 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 ZNF365Q70YC5 407 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 POLNQ7Z5Q5 900 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 SIX6OS1Q8N1H7 587 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 TTC9BQ8N6N2 239 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 FAM71DQ8N9W8 422 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 MYCBPAPQ8TBZ2 947 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 ETNK2Q9NVF9 386 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 DDX56Q9NY93 547 aaKnown RBP14.29□□□□□ -0.12
HCFC2-202ENST00000544223 BCCIPQ9P287 314 aaKnown RBP eCLIP14.29□□□□□ -0.12
HCFC2-202ENST00000544223 ADAM21Q9UKJ8 722 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 SNX10Q9Y5X0 201 aa14.29□□□□□ -0.12
HCFC2-202ENST00000544223 SPTBN5Q9NRC6 3674 aaKnown RBP14.28□□□□□ -0.12
HCFC2-202ENST00000544223 I6L893 689 aaPredicted RBP14.28□□□□□ -0.12
HCFC2-202ENST00000544223 PIAS1O75925 651 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 GNRH1P01148 92 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 RPL9P32969 192 aaKnown RBP14.28□□□□□ -0.12
HCFC2-202ENST00000544223 SLCO1A2P46721 670 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 LHX1P48742 406 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 SULT1E1P49888 294 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 MRPS5P82675 430 aaKnown RBP14.28□□□□□ -0.12
HCFC2-202ENST00000544223 GPS1Q13098 491 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 CLUL1Q15846 466 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 CAPN12Q6ZSI9 719 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 SLC26A9Q7LBE3 791 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 ART4Q93070 314 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 RUFY1Q96T51 708 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 TRAIPQ9BWF2 469 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 RABEP2Q9H5N1 569 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 PAK6Q9NQU5 681 aaPredicted RBP14.28□□□□□ -0.12
HCFC2-202ENST00000544223 H0YGN5 161 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 ACSL3O95573 720 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 SETSIPP0DME0 302 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 KLRC2P26717 231 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 SLC29A2Q14542 456 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 TRIM60Q495X7 471 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 TP53INP2Q8IXH6 220 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 PCDH19Q8TAB3 1148 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 SPATA18Q8TC71 538 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 BEGAINQ9BUH8 593 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 PCDH18Q9HCL0 1135 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 PIGVQ9NUD9 493 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 NFS1Q9Y697 457 aa14.28□□□□□ -0.12
HCFC2-202ENST00000544223 PDE4DIPQ5VU43 2346 aa14.27□□□□□ -0.12
HCFC2-202ENST00000544223 VWA8A3KMH1 1905 aa14.27□□□□□ -0.12
HCFC2-202ENST00000544223 DNM1LO00429 736 aa14.27□□□□□ -0.13
HCFC2-202ENST00000544223 ATF2P15336 505 aa14.27□□□□□ -0.13
HCFC2-202ENST00000544223 PCK1P35558 622 aa14.27□□□□□ -0.13
HCFC2-202ENST00000544223 CETN2P41208 172 aa14.27□□□□□ -0.13
HCFC2-202ENST00000544223 YWHAZP63104 245 aaKnown RBP14.27□□□□□ -0.13
HCFC2-202ENST00000544223 OASLQ15646 514 aaKnown RBP14.27□□□□□ -0.13
HCFC2-202ENST00000544223 PPP2R5EQ16537 467 aa14.27□□□□□ -0.13
HCFC2-202ENST00000544223 SLC39A12Q504Y0 691 aa14.27□□□□□ -0.13
HCFC2-202ENST00000544223 IZUMO3Q5VZ72 239 aa14.27□□□□□ -0.13
HCFC2-202ENST00000544223 COLGALT2Q8IYK4 626 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms