RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 FICDQ9BVA6 458 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 TARS2Q9BW92 718 aaKnown RBP15.92■□□□□ 0.14
CHD4-210ENST00000544040 CLEC4MQ9H2X3 399 aaPredicted RBP15.92■□□□□ 0.14
CHD4-210ENST00000544040 RNF181Q9P0P0 153 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 TUBGCP4Q9UGJ1 667 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 SDR42E2A6NKP2 422 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 E7ENQ6 273 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 KATNA1O75449 491 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 DDR2Q16832 855 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 MOV10L1Q9BXT6 1211 aaKnown RBP15.92■□□□□ 0.14
CHD4-210ENST00000544040 EPS8L2Q9H6S3 715 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 RGS18Q9NS28 235 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 NDUFA13Q9P0J0 144 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 STK39Q9UEW8 545 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 NARFQ9UHQ1 456 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 SLC25A13Q9UJS0 675 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 TUBE1Q9UJT0 475 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 ERI2A8K979 691 aaKnown RBP15.92■□□□□ 0.14
CHD4-210ENST00000544040 MAP3K13O43283 966 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 TBC1D12O60347 775 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 NDUFB10O96000 172 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 ASS1P00966 412 aaKnown RBP15.92■□□□□ 0.14
CHD4-210ENST00000544040 ALDH1A3P47895 512 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 MYO1HQ8N1T3 1032 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 NSUN4Q96CB9 384 aaKnown RBP15.92■□□□□ 0.14
CHD4-210ENST00000544040 TRPC4Q9UBN4 977 aa15.92■□□□□ 0.14
CHD4-210ENST00000544040 PNPLA7Q6ZV29 1317 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 ATG7O95352 703 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 GUCA1AP43080 201 aaPredicted RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 C1DQ13901 141 aaKnown RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 MACC1Q6ZN28 852 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 FAM120BQ96EK7 910 aaKnown RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 DPP3Q9NY33 737 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 FLT1P17948 1338 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 PON1P27169 355 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 ZNF177Q13360 481 aaPredicted RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 TDRD10Q5VZ19 366 aaKnown RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 UTS2BQ765I0 119 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 CARNMT1Q8N4J0 409 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 ZSCAN18Q8TBC5 510 aaPredicted RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 FAM45AQ8TCE6 357 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 FUT8Q9BYC5 575 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 SEMA6AQ9H2E6 1030 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 GH1P01241 217 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 ITGB6P18564 788 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 MAPK1P28482 360 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 HALP42357 657 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 ALDH9A1P49189 494 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHD4-210ENST00000544040 IER5Q5VY09 327 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 ANKS6Q68DC2 871 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 COMMD2Q86X83 199 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 CLVS1Q8IUQ0 354 aaPredicted RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 ZNF609O15014 1411 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 SNUPNO95149 360 aaKnown RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 STAU1O95793 577 aaKnown RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 SLC2A4P14672 509 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 HPGDP15428 266 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 PTPN4P29074 926 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 IL12RB1P42701 662 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 C16orf62Q7Z3J2 963 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 PTAR1Q7Z6K3 402 aaPredicted RBP15.91■□□□□ 0.14
CHD4-210ENST00000544040 FANCEQ9HB96 536 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 N6AMT1Q9Y5N5 214 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 MTSS1O43312 755 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 PCSK1P29120 753 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 PHKG1Q16816 387 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 AHI1Q8N157 1196 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 RNF148Q8N7C7 305 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 PHF21BQ96EK2 531 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 POLE3Q9NRF9 147 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 SLC38A7Q9NVC3 462 aa15.91■□□□□ 0.14
CHD4-210ENST00000544040 PLA2G6O60733 806 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 TAF5Q15542 800 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 CNGA2Q16280 664 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 PKN2Q16513 984 aaKnown RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 SDE2Q6IQ49 451 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 APLFQ8IW19 511 aaPredicted RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 CACTIN-AS1Q8N1I8 211 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 ZCCHC7Q8N3Z6 543 aaKnown RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 ATP6V0D2Q8N8Y2 350 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 NMRK1Q9NWW6 199 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 COMMD8Q9NX08 183 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 FOXN3O00409 490 aaPredicted RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 CYP19A1P11511 503 aaPredicted RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 RAG1P15918 1043 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 MAGEA10P43363 369 aaPredicted RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 CAPN6Q9Y6Q1 641 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 A0A087X0T9 212 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 NR3C2P08235 984 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 FAM228BP0C875 321 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 ATP6V1C1P21283 382 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 MIB1Q86YT6 1006 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 IZUMO1Q8IYV9 350 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 RUSC1Q9BVN2 902 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 UBE2OQ9C0C9 1292 aaKnown RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 ZNF624Q9P2J8 865 aaPredicted RBP15.9■□□□□ 0.14
CHD4-210ENST00000544040 HS6ST1O60243 411 aa15.9■□□□□ 0.14
CHD4-210ENST00000544040 ZBTB7AO95365 584 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms