RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, human

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-223	ENST00000543658	PTPN2	P17706	415 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	POU3F3	P20264	500 aa	Predicted RBP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	CDC25C	P30307	473 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	RNASE9	P60153	205 aa	Known RBP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	YWHAG	P61981	247 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	TAF10	Q12962	218 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	PTP4A2	Q12974	167 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	RARS2	Q5T160	578 aa	Known RBP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	OLFML1	Q6UWY5	402 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	PDZD4	Q76G19	769 aa	Predicted RBP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	RSRC2	Q7L4I2	434 aa	Known RBP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	SLC26A9	Q7LBE3	791 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	TADA2B	Q86TJ2	420 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	DEFB123	Q8N688	67 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	CLEC4C	Q8WTT0	213 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	RNF139	Q8WU17	664 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	MYLIP	Q8WY64	445 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	SMG7	Q92540	1137 aa	Known RBP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	MCRS1	Q96EZ8	462 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	CALR3	Q96L12	384 aa	Known RBP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	MCEE	Q96PE7	176 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	TTLL2	Q9BWV7	592 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	PRKD2	Q9BZL6	878 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	NACA2	Q9H009	215 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	POPDC2	Q9HBU9	364 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	GMIP	Q9P107	970 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	LCMT1	Q9UIC8	334 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	STAP1	Q9ULZ2	295 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	PYCARD	Q9ULZ3	195 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	REXO2	Q9Y3B8	237 aa	Known RBP	12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	USP3	Q9Y6I4	520 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	DOCK6	Q96HP0	2047 aa		12.47	□□□□□ -0.41
DDB1-223	ENST00000543658	NUP210	Q8TEM1	1887 aa	Predicted RBP	12.46	□□□□□ -0.41
DDB1-223	ENST00000543658		A0A0A6YYK5	440 aa	Predicted RBP	12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	SIGLEC16	A6NMB1	481 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	PJA2	O43164	708 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	DAB1	O75553	588 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	GRAP2	O75791	330 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	CYP1A2	P05177	515 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	POU2F2	P09086	479 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	NCAM1	P13591	858 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	HOXB8	P17481	243 aa	Predicted RBP	12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	MSN	P26038	577 aa	Known RBP	12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	USP46	P62068	366 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	YWHAZ	P63104	245 aa	Known RBP	12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	ADGRE1	Q14246	886 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	SKIV2L	Q15477	1246 aa	Known RBP	12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	ARHGAP15	Q53QZ3	475 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	PM20D1	Q6GTS8	502 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	PLEKHA7	Q6IQ23	1121 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	CES5A	Q6NT32	575 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	ANKRD54	Q6NXT1	300 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658		Q7L0L9	218 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	MON1A	Q86VX9	555 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	CMAS	Q8NFW8	434 aa	Predicted RBP	12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	FEZF2	Q8TBJ5	459 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	MRPS31	Q92665	395 aa	Known RBP	12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	ARHGEF26	Q96DR7	871 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	MYRFL	Q96LU7	910 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	CDK5RAP1	Q96SZ6	601 aa	Known RBP	12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	LZTFL1	Q9NQ48	299 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	ABCC13	Q9NSE7	274 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	OLA1	Q9NTK5	396 aa	Known RBP	12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	ANAPC7	Q9UJX3	599 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	GUCA1B	Q9UMX6	200 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	ZKSCAN5	Q9Y2L8	839 aa		12.46	□□□□□ -0.41
DDB1-223	ENST00000543658	CHD7	Q9P2D1	2997 aa		12.46	□□□□□ -0.42
DDB1-223	ENST00000543658	CHD9	Q3L8U1	2897 aa		12.46	□□□□□ -0.42
DDB1-223	ENST00000543658		A0A1W2PQH9	124 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	MACROD2	A1Z1Q3	448 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	YJEFN3	A6XGL0	299 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	BTNL10	A8MVZ5	291 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658		E7ENQ6	273 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	MYO1F	O00160	1098 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	ZNF197	O14709	1029 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	LINC01565	O15544	149 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	ATXN8OS	P0DMR3	200 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	HMGA1	P17096	107 aa	Known RBP	12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	GPD1	P21695	349 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	GABRR2	P28476	465 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	SDC4	P31431	198 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	RBM10	P98175	930 aa	Known RBP	12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	ADAM15	Q13444	863 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	MAMLD1	Q13495	774 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	BSPRY	Q5W0U4	402 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	TMC5	Q6UXY8	1006 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	TMEM184A	Q6ZMB5	413 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	SLC35G2	Q8TBE7	412 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	NDRG1	Q92597	394 aa	Known RBP	12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	ALS2CR12	Q96Q35	445 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	CDX2	Q99626	313 aa	Predicted RBP	12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	APOL5	Q9BWW9	433 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	ATXN3L	Q9H3M9	355 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	TRPC7	Q9HCX4	862 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	TRMT1	Q9NXH9	659 aa	Known RBP	12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	RRN3	Q9NYV6	651 aa		12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
DDB1-223	ENST00000543658	IL37	Q9NZH6	218 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms