RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-217	ENST00000543449	TTC16	Q8NEE8	873 aa		10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	NELL1	Q92832	810 aa		10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	TATDN2	Q93075	761 aa		10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	ELMO3	Q96BJ8	720 aa		10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	RNF38	Q9H0F5	515 aa		10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	NUP62CL	Q9H1M0	184 aa		10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	GMIP	Q9P107	970 aa		10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	CFAP97	Q9P2B7	532 aa		10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	CHORDC1	Q9UHD1	332 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	ZNF510	Q9Y2H8	683 aa		10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	WNT6	Q9Y6F9	365 aa		10.84	□□□□□ -0.67
NPIPB4-217	ENST00000543449	CCDC163	A0A0D9SF12	145 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	GTPBP10	A4D1E9	387 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	CHURC1-FNTB	B4DL54	471 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	HHLA1	C9JL84	531 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	XPO1	O14980	1071 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	BEST1	O76090	585 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	CD19	P15391	556 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	ERCC5	P28715	1186 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	PLA2G4A	P47712	749 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	STX17	P56962	302 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	COG7	P83436	770 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	GAD2	Q05329	585 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	HSF5	Q4G112	596 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	TXNDC11	Q6PKC3	985 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	ADGRG2	Q8IZP9	1017 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	SCML4	Q8N228	414 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	GPR161	Q8N6U8	529 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	ZBTB44	Q8NCP5	570 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	EHBP1	Q8NDI1	1231 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	TTC8	Q8TAM2	541 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	DCLK3	Q9C098	648 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	THAP9	Q9H5L6	903 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	LRRC4	Q9HBW1	653 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	OLA1	Q9NTK5	396 aa	Known RBP	10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	SMPD4	Q9NXE4	827 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	DNMT3L	Q9UJW3	386 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	RAB23	Q9ULC3	237 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	STRIP2	Q9ULQ0	834 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	SLC8A2	Q9UPR5	921 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	USP3	Q9Y6I4	520 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	GREB1	Q4ZG55	1949 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	CACNA1H	O95180	2353 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	OBSL1	O75147	1896 aa		10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPB4-217	ENST00000543449	F5	P12259	2224 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	MED7	O43513	233 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	LILRB5	O75023	590 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	GALK1	P51570	392 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	MFAP3	P55082	362 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	LRMP	Q12912	555 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	E2F5	Q15329	346 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	DHCR24	Q15392	516 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	CNGA2	Q16280	664 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	MEA1	Q16626	185 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	RAB41	Q5JT25	222 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	TMEM270	Q6UE05	265 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	LCLAT1	Q6UWP7	414 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	HTR3D	Q70Z44	454 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	CAMKK1	Q8N5S9	505 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	KCTD13	Q8WZ19	329 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	PHOX2B	Q99453	314 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	ARID3A	Q99856	593 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	CCSER2	Q9H7U1	834 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	NAGPA	Q9UK23	515 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	TSPAN16	Q9UKR8	245 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	PCDHB4	Q9Y5E5	795 aa		10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	ZNF638	Q14966	1978 aa	Known RBP	10.82	□□□□□ -0.68
NPIPB4-217	ENST00000543449	CYP26A1	O43174	497 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	HOXC11	O43248	304 aa	Predicted RBP	10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	SART1	O43290	800 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	ZBED1	O96006	694 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	APOD	P05090	189 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	CYP17A1	P05093	508 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	ADH5	P11766	374 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	RARG	P13631	454 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	GOLGA7B	Q2TAP0	167 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	C10orf120	Q5SQS8	335 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	PM20D1	Q6GTS8	502 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	FSTL4	Q6MZW2	842 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	GBP6	Q6ZN66	633 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	RSRC2	Q7L4I2	434 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	PIGZ	Q86VD9	579 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	LONP2	Q86WA8	852 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	SIX6OS1	Q8N1H7	587 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	UBR7	Q8N806	425 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	LMO3	Q8TAP4	145 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	RIN3	Q8TB24	985 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	KCNV2	Q8TDN2	545 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	RUBCN	Q92622	972 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	GOLGA1	Q92805	767 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	ZFR	Q96KR1	1074 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	CNOT6L	Q96LI5	555 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	HSFY1	Q96LI6	401 aa		10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	IPO9	Q96P70	1041 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	XPO6	Q96QU8	1125 aa	Known RBP	10.81	□□□□□ -0.68
NPIPB4-217	ENST00000543449	PNKP	Q96T60	521 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms