RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 PNMA6AP0CW24 399 aaPredicted RBP19.34■□□□□ 0.69
COPS7A-216ENST00000543170 GDI1P31150 447 aa19.34■□□□□ 0.69
COPS7A-216ENST00000543170 ZNF445P59923 1031 aa19.34■□□□□ 0.69
COPS7A-216ENST00000543170 POLR2FP61218 127 aaKnown RBP19.34■□□□□ 0.69
COPS7A-216ENST00000543170 ADIGQ0VDE8 80 aa19.34■□□□□ 0.69
COPS7A-216ENST00000543170 TMEM31Q5JXX7 168 aa19.34■□□□□ 0.69
COPS7A-216ENST00000543170 PMF1Q6P1K2 205 aa19.34■□□□□ 0.69
COPS7A-216ENST00000543170 TADA2BQ86TJ2 420 aa19.34■□□□□ 0.69
COPS7A-216ENST00000543170 DDX42Q86XP3 938 aaKnown RBP eCLIP19.34■□□□□ 0.69
COPS7A-216ENST00000543170 SIX6OS1Q8N1H7 587 aa19.34■□□□□ 0.69
COPS7A-216ENST00000543170 ULBP1Q9BZM6 244 aa19.34■□□□□ 0.69
COPS7A-216ENST00000543170 RNF38Q9H0F5 515 aa19.34■□□□□ 0.69
COPS7A-216ENST00000543170 THG1LQ9NWX6 298 aaKnown RBP19.34■□□□□ 0.69
COPS7A-216ENST00000543170 FBXL21Q9UKT6 434 aa19.34■□□□□ 0.69
COPS7A-216ENST00000543170 A0A1W2PQH9 124 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 TEX33O43247 280 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 SERPINC1P01008 464 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 ACADSBP45954 432 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 PGFP49763 221 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 MTF1Q14872 753 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 BHLHA9Q7RTU4 235 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 SCD5Q86SK9 330 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 SLC47A2Q86VL8 602 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 RIN3Q8TB24 985 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 SH3RF2Q8TEC5 729 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 IRGQQ8WZA9 623 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 PCMTD1Q96MG8 357 aaPredicted RBP19.33■□□□□ 0.68
COPS7A-216ENST00000543170 SPAG5Q96R06 1193 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 LHX5Q9H2C1 402 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 CCSER2Q9H7U1 834 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 NMUR1Q9HB89 426 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 ARHGEF3Q9NR81 526 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.33■□□□□ 0.68
COPS7A-216ENST00000543170 OSER1Q9NX31 292 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 CPQQ9Y646 472 aa19.33■□□□□ 0.68
COPS7A-216ENST00000543170 FBXO21O94952 628 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 MBL2P11226 248 aaPredicted RBP19.32■□□□□ 0.68
COPS7A-216ENST00000543170 RALAP11233 206 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 CYP11B1P15538 503 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 SOX5P35711 763 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 MLLT6P55198 1093 aaPredicted RBP19.32■□□□□ 0.68
COPS7A-216ENST00000543170 FANCCQ00597 558 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 PRKCQQ04759 706 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 DENND1BQ6P3S1 775 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 EPS8L1Q8TE68 723 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 MSANTD3Q96H12 275 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 ZFRQ96KR1 1074 aaKnown RBP19.32■□□□□ 0.68
COPS7A-216ENST00000543170 SLC4A5Q9BY07 1137 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 NLRC4Q9NPP4 1024 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 NAGPAQ9UK23 515 aa19.32■□□□□ 0.68
COPS7A-216ENST00000543170 KRBA1A5PL33 1030 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 LEFTY2O00292 366 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 SART1O43290 800 aaKnown RBP19.31■□□□□ 0.68
COPS7A-216ENST00000543170 GABBR2O75899 941 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 RARGP13631 454 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 KRT9P35527 623 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 ATP5C1P36542 298 aaKnown RBP19.31■□□□□ 0.68
COPS7A-216ENST00000543170 STAT1P42224 750 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 RGS7P49802 495 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 DAOAP59103 153 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 YWHAGP61981 247 aaKnown RBP eCLIP19.31■□□□□ 0.68
COPS7A-216ENST00000543170 ZXDBP98169 803 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 NR1I3Q14994 352 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 MLF2Q15773 248 aaPredicted RBP19.31■□□□□ 0.68
COPS7A-216ENST00000543170 ZNF677Q86XU0 584 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 GPIHBP1Q8IV16 184 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 FMNL3Q8IVF7 1028 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 SIX5Q8N196 739 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 SHDQ96IW2 340 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 NAP1L5Q96NT1 182 aaPredicted RBP19.31■□□□□ 0.68
COPS7A-216ENST00000543170 FAM83CQ9BQN1 747 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 MYO6Q9UM54 1294 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 CEP83Q9Y592 693 aa19.31■□□□□ 0.68
COPS7A-216ENST00000543170 FAM86C2PA6NEL3 165 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 GLULP15104 373 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 CDH5P33151 784 aaPredicted RBP19.3■□□□□ 0.68
COPS7A-216ENST00000543170 STARD6P59095 220 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 PDCLQ13371 301 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 PDGFRLQ15198 375 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 SLC44A4Q53GD3 710 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 CC2D1AQ6P1N0 951 aaPredicted RBP19.3■□□□□ 0.68
COPS7A-216ENST00000543170 HFE2Q6ZVN8 426 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 TMEM110Q86TL2 294 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 OSCP1Q8WVF1 389 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 DDX1Q92499 740 aaKnown RBP19.3■□□□□ 0.68
COPS7A-216ENST00000543170 NACA2Q9H009 215 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 OLA1Q9NTK5 396 aaKnown RBP19.3■□□□□ 0.68
COPS7A-216ENST00000543170 CYTH4Q9UIA0 394 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 CA14Q9ULX7 337 aa19.3■□□□□ 0.68
COPS7A-216ENST00000543170 LSM8O95777 96 aaKnown RBP19.29■□□□□ 0.68
COPS7A-216ENST00000543170 LCP1P13796 627 aa19.29■□□□□ 0.68
COPS7A-216ENST00000543170 UBASH3AP57075 661 aa19.29■□□□□ 0.68
COPS7A-216ENST00000543170 FIGNQ5HY92 759 aa19.29■□□□□ 0.68
COPS7A-216ENST00000543170 C1orf228Q6PIY5 440 aa19.29■□□□□ 0.68
COPS7A-216ENST00000543170 CSGALNACT1Q8TDX6 532 aa19.29■□□□□ 0.68
COPS7A-216ENST00000543170 NOX5Q96PH1 765 aa19.29■□□□□ 0.68
COPS7A-216ENST00000543170 DDX23Q9BUQ8 820 aaKnown RBP19.29■□□□□ 0.68
COPS7A-216ENST00000543170 SMPD4Q9NXE4 827 aa19.29■□□□□ 0.68
COPS7A-216ENST00000543170 DNMT3LQ9UJW3 386 aa19.29■□□□□ 0.68
COPS7A-216ENST00000543170 COL4A3Q01955 1670 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms