RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 FASTKD5Q7L8L6 764 aaKnown RBP17.27■□□□□ 0.36
KDM2B-216ENST00000543025 TMEM176AQ96HP8 235 aa17.27■□□□□ 0.36
KDM2B-216ENST00000543025 TWNKQ96RR1 684 aa17.27■□□□□ 0.36
KDM2B-216ENST00000543025 PEBP4Q96S96 227 aa17.27■□□□□ 0.36
KDM2B-216ENST00000543025 IQCGQ9H095 443 aaKnown RBP17.27■□□□□ 0.36
KDM2B-216ENST00000543025 RPF1Q9H9Y2 349 aaKnown RBP17.27■□□□□ 0.36
KDM2B-216ENST00000543025 PNPLA8Q9NP80 782 aa17.27■□□□□ 0.36
KDM2B-216ENST00000543025 CNTN3Q9P232 1028 aa17.27■□□□□ 0.36
KDM2B-216ENST00000543025 SIX4Q9UIU6 781 aa17.27■□□□□ 0.36
KDM2B-216ENST00000543025 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.27■□□□□ 0.36
KDM2B-216ENST00000543025 IGKV6-21A0A0C4DH24 114 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 CXCL8P10145 99 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 BGNP21810 368 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 ABL2P42684 1182 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 TTC39BQ5VTQ0 682 aaPredicted RBP17.26■□□□□ 0.35
KDM2B-216ENST00000543025 TRIM68Q6AZZ1 485 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 RGMBQ6NW40 437 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 SLC26A11Q86WA9 606 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 C1orf127Q8N9H9 656 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 CFAP61Q8NHU2 1237 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 SPDL1Q96EA4 605 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 SMYD3Q9H7B4 428 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 FBXO6Q9NRD1 293 aaPredicted RBP17.26■□□□□ 0.35
KDM2B-216ENST00000543025 PAK5Q9P286 719 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 HMGXB4Q9UGU5 601 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 ABT1Q9ULW3 272 aaKnown RBP17.26■□□□□ 0.35
KDM2B-216ENST00000543025 INO80B-WBP1J3KQ70 363 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 KLF11O14901 512 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 GYG2O15488 501 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 GSC2O15499 205 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 CILPO75339 1184 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 ATP6V1C1P21283 382 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 GPD2P43304 727 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 GTF2A2P52657 109 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 SYCP2LQ5T4T6 812 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 CCDC62Q6P9F0 684 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 CDR2LQ86X02 465 aaPredicted RBP17.26■□□□□ 0.35
KDM2B-216ENST00000543025 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.26■□□□□ 0.35
KDM2B-216ENST00000543025 FRMD8Q9BZ67 464 aaPredicted RBP17.26■□□□□ 0.35
KDM2B-216ENST00000543025 INO80BQ9C086 356 aaPredicted RBP17.26■□□□□ 0.35
KDM2B-216ENST00000543025 FZD8Q9H461 694 aa17.26■□□□□ 0.35
KDM2B-216ENST00000543025 CORO1CQ9ULV4 474 aaPredicted RBP17.26■□□□□ 0.35
KDM2B-216ENST00000543025 H7C0C1 242 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 COPEO14579 308 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 B4GALT5O43286 388 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 AVILO75366 819 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 NEBLO76041 1014 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 HMGCRP04035 888 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 GPD1P21695 349 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 ATP5OP48047 213 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 SERPINB4P48594 390 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 CBLBQ13191 982 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 KRT72Q14CN4 511 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 LY6KQ17RY6 165 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 TSNAXIP1Q2TAA8 658 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 CAPRIN2Q6IMN6 1127 aaKnown RBP17.25■□□□□ 0.35
KDM2B-216ENST00000543025 RFWD3Q6PCD5 774 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 NLRP4Q96MN2 994 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 CNPY3Q9BT09 278 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 FAM167BQ9BTA0 163 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 ELOVL4Q9GZR5 314 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 RAB6BQ9NRW1 208 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 STOML1Q9UBI4 398 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 ANK1P16157 1881 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 CCL15-CCL14A0A0B4J2E2 113 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 ZBTB42B2RXF5 422 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 SKAP2O75563 359 aaPredicted RBP17.25■□□□□ 0.35
KDM2B-216ENST00000543025 CCL15Q16663 113 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 KHDC1Q4VXA5 237 aaKnown RBP17.25■□□□□ 0.35
KDM2B-216ENST00000543025 EEF1DP3Q658K8 133 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 TMEM192Q8IY95 271 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 BRI3BPQ8WY22 251 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 MCUR1Q96AQ8 359 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 SRPK1Q96SB4 655 aaKnown RBP17.25■□□□□ 0.35
KDM2B-216ENST00000543025 CDT1Q9H211 546 aa17.25■□□□□ 0.35
KDM2B-216ENST00000543025 SOWAHBA6NEL2 793 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 KRT37O76014 449 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 ITGB3P05106 788 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 NFICP08651 508 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 MYL2P10916 166 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 ACADSP16219 412 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 YWHAZP63104 245 aaKnown RBP17.24■□□□□ 0.35
KDM2B-216ENST00000543025 SH3PXD2AQ5TCZ1 1133 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 DSTYKQ6XUX3 929 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 LBX2Q6XYB7 198 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 CYP4V2Q6ZWL3 525 aaPredicted RBP17.24■□□□□ 0.35
KDM2B-216ENST00000543025 EEPD1Q7L9B9 569 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 PRPF39Q86UA1 669 aaKnown RBP17.24■□□□□ 0.35
KDM2B-216ENST00000543025 TRIM50Q86XT4 487 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 CTAGE3PQ8IX95 158 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 LMNTD2Q8IXW0 634 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.24■□□□□ 0.35
KDM2B-216ENST00000543025 CFAP36Q96G28 342 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 OXNAD1Q96HP4 312 aaPredicted RBP17.24■□□□□ 0.35
KDM2B-216ENST00000543025 RNF157Q96PX1 679 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 ZNF180Q9UJW8 692 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 TTLL3Q9Y4R7 772 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 TRIM49D1C9J1S8 452 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 PRPSAP2O60256 369 aa17.24■□□□□ 0.35
KDM2B-216ENST00000543025 FAM155BO75949 473 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms