RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 TRMT5Q32P41 509 aaKnown RBP13.45□□□□□ -0.26
DDX11-223ENST00000542838 LGSNQ5TDP6 509 aa13.45□□□□□ -0.26
DDX11-223ENST00000542838 ANGEL2Q5VTE6 544 aaKnown RBP13.45□□□□□ -0.26
DDX11-223ENST00000542838 FOXB2Q5VYV0 432 aa13.45□□□□□ -0.26
DDX11-223ENST00000542838 C1orf228Q6PIY5 440 aa13.45□□□□□ -0.26
DDX11-223ENST00000542838 FGD4Q96M96 766 aa13.45□□□□□ -0.26
DDX11-223ENST00000542838 PANX3Q96QZ0 392 aa13.45□□□□□ -0.26
DDX11-223ENST00000542838 LHX5Q9H2C1 402 aa13.45□□□□□ -0.26
DDX11-223ENST00000542838 ZC3H7BQ9UGR2 993 aaKnown RBP13.45□□□□□ -0.26
DDX11-223ENST00000542838 FER1L6Q2WGJ9 1857 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 CYB561D2O14569 222 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 MED7O43513 233 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 BAG2O95816 211 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 MRPS5P82675 430 aaKnown RBP13.44□□□□□ -0.26
DDX11-223ENST00000542838 GRM1Q13255 1194 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 ORC1Q13415 861 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 CES4AQ5XG92 561 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 CRLF3Q8IUI8 442 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 ULK2Q8IYT8 1036 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 RILPQ96NA2 401 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 TTC1Q99614 292 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 CPSF2Q9P2I0 782 aaKnown RBP13.44□□□□□ -0.26
DDX11-223ENST00000542838 PLA2G4CQ9UP65 541 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 PPME1Q9Y570 386 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 DCAF8L1A6NGE4 600 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 WNT10BO00744 389 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 AP1G2O75843 785 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 C1QAP02745 245 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 AP2B1P63010 937 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 GSTA3Q16772 222 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 FAXCQ5TGI0 409 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 IZUMO2Q6UXV1 221 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 ZPBP2Q6X784 338 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 GBP5Q96PP8 586 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 TRIM4Q9C037 500 aa13.44□□□□□ -0.26
DDX11-223ENST00000542838 COL11A1P12107 1806 aaPredicted RBP13.44□□□□□ -0.26
DDX11-223ENST00000542838 FAM189A1O60320 539 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 RAB27AP51159 221 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 DNAL1Q4LDG9 190 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 C1orf146Q5VVC0 180 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 MYLK4Q86YV6 388 aaPredicted RBP13.43□□□□□ -0.26
DDX11-223ENST00000542838 CCNJLQ8IV13 435 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.43□□□□□ -0.26
DDX11-223ENST00000542838 PEBP4Q96S96 227 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 DDX50Q9BQ39 737 aaKnown RBP13.43□□□□□ -0.26
DDX11-223ENST00000542838 ZNF277Q9NRM2 450 aaPredicted RBP13.43□□□□□ -0.26
DDX11-223ENST00000542838 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.43□□□□□ -0.26
DDX11-223ENST00000542838 ASNSD1Q9NWL6 643 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 NDE1Q9NXR1 346 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 PAK5Q9P286 719 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 PDP2Q9P2J9 529 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 ZNF180Q9UJW8 692 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 KCNN4O15554 427 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 UGT1A9O60656 530 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 TOM1L1O75674 476 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 RFPL1O75677 317 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 ZCCHC18P0CG32 403 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 OSBPP22059 807 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 DSG1Q02413 1049 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 TEX44Q53QW1 395 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 MTMR14Q8NCE2 650 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 ZFAND2BQ8WV99 257 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 NR1H4Q96RI1 486 aaPredicted RBP13.43□□□□□ -0.26
DDX11-223ENST00000542838 CCDC106Q9BWC9 280 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 MRPL4Q9BYD3 311 aaKnown RBP13.43□□□□□ -0.26
DDX11-223ENST00000542838 XYLT2Q9H1B5 865 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 UGT1A7Q9HAW7 530 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 UGT1A10Q9HAW8 530 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 UGT1A8Q9HAW9 530 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 SMYD2Q9NRG4 433 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 PCMTD2Q9NV79 361 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 DDX43Q9NXZ2 648 aaKnown RBP13.43□□□□□ -0.26
DDX11-223ENST00000542838 SIRPGQ9P1W8 387 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 SLC7A8Q9UHI5 535 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 PRR5-ARHGAP8B1AHC4 643 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 OGTO15294 1046 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 KRT19P08727 400 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 CDH8P55286 799 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 ACTR3P61158 418 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 ARHGAP8P85298 464 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 ADPGKQ9BRR6 497 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 POPDC2Q9HBU9 364 aa13.43□□□□□ -0.26
DDX11-223ENST00000542838 TNNC2P02585 160 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 LYNP07948 512 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 CCNFP41002 786 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 TFDP2Q14188 446 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 SURF1Q15526 300 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 FAM47CQ5HY64 1035 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 FAM102AQ5T9C2 384 aaPredicted RBP13.42□□□□□ -0.26
DDX11-223ENST00000542838 SH3PXD2AQ5TCZ1 1133 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 SLC25A41Q8N5S1 370 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 MTBPQ96DY7 904 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 ECSITQ9BQ95 431 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 NIFKQ9BYG3 293 aaKnown RBP13.42□□□□□ -0.26
DDX11-223ENST00000542838 C20orf27Q9GZN8 174 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 TRDMT1O14717 391 aaKnown RBP13.42□□□□□ -0.26
DDX11-223ENST00000542838 MSCO60682 206 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 KRT38O76015 456 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 USP1O94782 785 aa13.42□□□□□ -0.26
DDX11-223ENST00000542838 HOXC6P09630 235 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms