RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 AP3D1O14617 1153 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 KIAA0355O15063 1070 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 PJA2O43164 708 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 DKC1O60832 514 aaKnown RBP eCLIP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 ATF2P15336 505 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 FDXRP22570 491 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 TGM1P22735 817 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 PSMC2P35998 433 aaKnown RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 PGM1P36871 562 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 CLRN1P58418 232 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 ATP2C1P98194 919 aaPredicted RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 SATB1Q01826 763 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 KRT17Q04695 432 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 TCF15Q12870 199 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 IQCB1Q15051 598 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 TAF11Q15544 211 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 MGAT5BQ3V5L5 792 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 GALNTL6Q49A17 601 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 GAGE13Q4V321 117 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 RILPL1Q5EBL4 403 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 MANEALQ5VSG8 457 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 AGBL4Q5VU57 503 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 SNX30Q5VWJ9 437 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 ABLIM2Q6H8Q1 611 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 ANO7Q6IWH7 933 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 MFSD5Q6N075 450 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 SLC30A6Q6NXT4 461 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 RINLQ6ZS11 566 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 LRRC8DQ7L1W4 858 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 TTC30AQ86WT1 665 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 NSUN4Q96CB9 384 aaKnown RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 YTHDC1Q96MU7 727 aaKnown RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 KLHL32Q96NJ5 620 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 SLC46A1Q96NT5 459 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 MPHOSPH8Q99549 860 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 VKORC1Q9BQB6 163 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 SLF1Q9BQI6 1058 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 SLC46A2Q9BY10 475 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 TTYH3Q9C0H2 523 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 ARHGAP39Q9C0H5 1083 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 ENKD1Q9H0I2 346 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 OR10A2Q9H208 303 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 PDCL3Q9H2J4 239 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 SLC6A15Q9H2J7 730 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 UNKLQ9H9P5 680 aaKnown RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 ZCCHC17Q9NP64 241 aaKnown RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 FSCN3Q9NQT6 498 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 MRPS18AQ9NVS2 196 aaKnown RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 CFDP1Q9UEE9 299 aaPredicted RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 ADD3Q9UEY8 706 aaKnown RBP4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 SHOC2Q9UQ13 582 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 CLSPNQ9HAW4 1339 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 KIAA0586Q9BVV6 1533 aa4.36□□□□□ -1.71
SFSWAP-211ENST00000542813 B5MCH6 92 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 H3BNC9 293 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 GTPBP1O00178 669 aaKnown RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 ZSCAN9O15535 394 aaPredicted RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 KLK10O43240 276 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 DHHO43323 396 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 RGS10O43665 173 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 VPS4BO75351 444 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 TAF5LO75529 589 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 RPP40O75818 363 aaKnown RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 MLYCDO95822 493 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 POMCP01189 267 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 HSPA1AP0DMV8 641 aaKnown RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 HSPA1BP0DMV9 641 aaKnown RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 CPA1P15085 419 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 PORP16435 677 aaPredicted RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 ARL3P36405 182 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 MLH1P40692 756 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 PAFAH1B1P43034 410 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 ADCY7P51828 1080 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 RRADP55042 308 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 NCKAP1LP55160 1127 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 RPP30P78346 268 aaKnown RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 PDCLQ13371 301 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 ACAP1Q15027 740 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 PLCB4Q15147 1175 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 TBCEQ15813 527 aaPredicted RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 NAA35Q5VZE5 725 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 DGAT2L7PQ6IED9 249 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 H1FNTQ75WM6 255 aaPredicted RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 CPLX4Q7Z7G2 160 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 REXO1L1PQ8IX06 675 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 RPAP2Q8IXW5 612 aaPredicted RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 DIS3L2Q8IYB7 885 aaKnown RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 CMTM4Q8IZR5 234 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 LINC00482Q8N8I6 264 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 PDPRQ8NCN5 879 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 CCDC191Q8NCU4 936 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 NUDT10Q8NFP7 164 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 TBC1D15Q8TC07 691 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 BPIFB1Q8TDL5 484 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 HMGB4Q8WW32 186 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 STAMQ92783 540 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 NUDT11Q96G61 164 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 APOPT1Q96IL0 206 aa4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 RPL10LQ96L21 214 aaKnown RBP4.35□□□□□ -1.71
SFSWAP-211ENST00000542813 BAG1Q99933 345 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms