RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 FAM118BQ9BPY3 351 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 ULBP1Q9BZM6 244 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 LRRC19Q9H756 370 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 CSNK1G1Q9HCP0 422 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 MARCH5Q9NX47 278 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.52□□□□□ -0.56
SCG3-202ENST00000542355 R3HDM2Q9Y2K5 976 aaKnown RBP11.52□□□□□ -0.56
SCG3-202ENST00000542355 UTP11Q9Y3A2 253 aaKnown RBP11.52□□□□□ -0.56
SCG3-202ENST00000542355 TRIM43BA6NCK2 446 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 C3orf70A6NLC5 250 aaPredicted RBP11.52□□□□□ -0.57
SCG3-202ENST00000542355 HHLA1C9JL84 531 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 SYN3O14994 580 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 HSF2BPO75031 334 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 TJP3O95049 919 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 CD48P09326 243 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 USP17L7P0C7H9 530 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 CSF2RAP15509 400 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 KDELR1P24390 212 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 CDKN2BP42772 138 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 ATXN1P54253 815 aaKnown RBP11.52□□□□□ -0.57
SCG3-202ENST00000542355 HDAC4P56524 1084 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 COPS2P61201 443 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 YWHAZP63104 245 aaKnown RBP11.52□□□□□ -0.57
SCG3-202ENST00000542355 DHX34Q14147 1143 aaKnown RBP11.52□□□□□ -0.57
SCG3-202ENST00000542355 SLC39A12Q504Y0 691 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 DCAF6Q58WW2 860 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 TFDP3Q5H9I0 405 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 VARS2Q5ST30 1063 aaKnown RBP11.52□□□□□ -0.57
SCG3-202ENST00000542355 ARCQ7LC44 396 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 DDX42Q86XP3 938 aaKnown RBP eCLIP11.52□□□□□ -0.57
SCG3-202ENST00000542355 DEFB106AQ8N104 65 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 CMASQ8NFW8 434 aaPredicted RBP11.52□□□□□ -0.57
SCG3-202ENST00000542355 TRIM43Q96BQ3 446 aaPredicted RBP11.52□□□□□ -0.57
SCG3-202ENST00000542355 TRIM51Q9BSJ1 452 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 UBXN6Q9BZV1 441 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 TRIM31Q9BZY9 425 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 PCYOX1Q9UHG3 505 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 NFU1Q9UMS0 254 aa11.52□□□□□ -0.57
SCG3-202ENST00000542355 TIMP1P01033 207 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 VAMP1P23763 118 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 CYP2F1P24903 491 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 RFC2P35250 354 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 MATKP42679 507 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 PTGIRP43119 386 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 PTPN9P43378 593 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 RAB41Q5JT25 222 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 C4orf50Q6ZRC1 276 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 TMEM173Q86WV6 379 aaPredicted RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 JAMLQ86YT9 394 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 DDX23Q9BUQ8 820 aaKnown RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 ADAM33Q9BZ11 813 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 ZCWPW1Q9H0M4 648 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 DMAP1Q9NPF5 467 aaPredicted RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 CNGB3Q9NQW8 809 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.51□□□□□ -0.57
SCG3-202ENST00000542355 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.51□□□□□ -0.57
SCG3-202ENST00000542355 TDRD15B5MCY1 1934 aaKnown RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 TET1Q8NFU7 2136 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 hCG_1818297A0A087WSY0 165 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 YJEFN3A6XGL0 299 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 E7ENQ6 273 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 DAPK3O43293 454 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 DGKIO75912 1065 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 FBXO21O94952 628 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 RAG1P15918 1043 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 GRIK1P39086 918 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 FNTAP49354 379 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 ALDH7A1P49419 539 aaKnown RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 CTXN3Q4LDR2 81 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 BOLA3Q53S33 107 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 FUT10Q6P4F1 479 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 HFE2Q6ZVN8 426 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 CYP4V2Q6ZWL3 525 aaPredicted RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 TMCO2Q7Z6W1 182 aaPredicted RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 DCP1BQ8IZD4 617 aaKnown RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 LRRC43Q8N309 656 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 C12orf50Q8NA57 414 aaPredicted RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 CENPIQ92674 756 aaPredicted RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 TBCBQ99426 244 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 TMEM175Q9BSA9 504 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 C11orf84Q9BUA3 381 aaPredicted RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 CALN1Q9BXU9 219 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 FUT8Q9BYC5 575 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 DCLK3Q9C098 648 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 DPH5Q9H2P9 285 aa11.51□□□□□ -0.57
SCG3-202ENST00000542355 ABI2Q9NYB9 513 aaPredicted RBP11.51□□□□□ -0.57
SCG3-202ENST00000542355 SF3B1O75533 1304 aaKnown RBP eCLIP11.5□□□□□ -0.57
SCG3-202ENST00000542355 FAM187AA6NFU0 413 aa11.5□□□□□ -0.57
SCG3-202ENST00000542355 CAPN9O14815 690 aa11.5□□□□□ -0.57
SCG3-202ENST00000542355 SASH3O75995 380 aa11.5□□□□□ -0.57
SCG3-202ENST00000542355 ZBED1O96006 694 aa11.5□□□□□ -0.57
SCG3-202ENST00000542355 TNFRSF8P28908 595 aa11.5□□□□□ -0.57
SCG3-202ENST00000542355 NOS2P35228 1153 aa11.5□□□□□ -0.57
SCG3-202ENST00000542355 TNNT3P45378 269 aaPredicted RBP11.5□□□□□ -0.57
SCG3-202ENST00000542355 CDH6P55285 790 aa11.5□□□□□ -0.57
SCG3-202ENST00000542355 DAOAP59103 153 aa11.5□□□□□ -0.57
SCG3-202ENST00000542355 DYNLT1P63172 113 aa11.5□□□□□ -0.57
SCG3-202ENST00000542355 HLTFQ14527 1009 aaKnown RBP eCLIP11.5□□□□□ -0.57
SCG3-202ENST00000542355 CCNG2Q16589 344 aa11.5□□□□□ -0.57
SCG3-202ENST00000542355 SYPL2Q5VXT5 272 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms