RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 SMIM31A0A1B0GVY4 71 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 PRMT3O60678 531 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 HNRNPH3P31942 346 aaKnown RBP11.54□□□□□ -0.56
CDH3-203ENST00000542274 CXCR5P32302 372 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 DSG3P32926 999 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 DNA2P51530 1060 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 COPS2P61201 443 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 RUNX1T1Q06455 604 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 TMEM132BQ14DG7 1078 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 UGCGQ16739 394 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 KCTD19Q17RG1 926 aaPredicted RBP11.54□□□□□ -0.56
CDH3-203ENST00000542274 ST13P4Q8IZP2 240 aaPredicted RBP11.54□□□□□ -0.56
CDH3-203ENST00000542274 DAW1Q8N136 415 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 ARRDC4Q8NCT1 418 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 ZSWIM2Q8NEG5 633 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 ERLEC1Q96DZ1 483 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 CCDC43Q96MW1 224 aaKnown RBP11.54□□□□□ -0.56
CDH3-203ENST00000542274 PACSIN1Q9BY11 444 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 GHITMQ9H3K2 345 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 GIN1Q9NXP7 522 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 TRAF3IP3Q9Y228 551 aa11.54□□□□□ -0.56
CDH3-203ENST00000542274 TK2O00142 265 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 PDE2AO00408 941 aaPredicted RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 DHX15O43143 795 aaKnown RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 KRT86O43790 486 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 LRRN2O75325 713 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 FGF18O76093 207 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 PTPN9P43378 593 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 IREB2P48200 963 aaKnown RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 ADAM17P78536 824 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 KRT76Q01546 638 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 RNASELQ05823 741 aaKnown RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 ITGA9Q13797 1035 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 LPIN1Q14693 890 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 SPA17Q15506 151 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 SGO2Q562F6 1265 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 SPDYAQ5MJ70 313 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 EMBQ6PCB8 327 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 B3GNT9Q6UX72 402 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 ZNF704Q6ZNC4 412 aaPredicted RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 CATSPERGQ6ZRH7 1159 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 TRAPPC11Q7Z392 1133 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 PEX26Q7Z412 305 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 SATL1Q86VE3 508 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 MMAAQ8IVH4 418 aaKnown RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 ZC3H3Q8IXZ2 948 aaKnown RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 REPS2Q8NFH8 660 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 CHMP6Q96FZ7 201 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 C12orf42Q96LP6 360 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 SAMD11Q96NU1 681 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 TEKT3Q9BXF9 490 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 MRPL1Q9BYD6 325 aaKnown RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 GPRC5CQ9NQ84 441 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 ARMCX3Q9UH62 379 aaPredicted RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 TMEM5Q9Y2B1 443 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 MROH7Q68CQ1 1323 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 MYH10P35580 1976 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 SCN4AP35499 1836 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 TYW5A2RUC4 315 aaKnown RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 BAIAP3O94812 1187 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 HLA-DRAP01903 254 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 PAEPP09466 180 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 CYP2J2P51589 502 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 ASTE1Q2TB18 679 aaPredicted RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 DPY19L2P1Q6NXN4 242 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 IQCKQ8N0W5 287 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 EME1Q96AY2 570 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 DACT3Q96B18 629 aaPredicted RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 MOGAT1Q96PD6 335 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 GANQ9H2C0 597 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 TUFT1Q9NNX1 390 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 GGT7Q9UJ14 662 aa11.53□□□□□ -0.56
CDH3-203ENST00000542274 ZNF214Q9UL59 606 aaPredicted RBP11.53□□□□□ -0.56
CDH3-203ENST00000542274 KLHL2O95198 593 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 OCM2P0CE71 109 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 OCMP0CE72 109 aaPredicted RBP11.52□□□□□ -0.56
CDH3-203ENST00000542274 TRIM49P0CI25 452 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 TRIM49CP0CI26 452 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 GM2AP17900 193 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 CDH3P22223 829 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 TBXAS1P24557 533 aaPredicted RBP11.52□□□□□ -0.56
CDH3-203ENST00000542274 RPL9P32969 192 aaKnown RBP11.52□□□□□ -0.56
CDH3-203ENST00000542274 SLC26A3P40879 764 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 MAGEA1P43355 309 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 OCRLQ01968 901 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 SP4Q02446 784 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 BAATQ14032 418 aaPredicted RBP11.52□□□□□ -0.56
CDH3-203ENST00000542274 MAPRE1Q15691 268 aaKnown RBP11.52□□□□□ -0.56
CDH3-203ENST00000542274 EDRF1Q3B7T1 1238 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 TKFCQ3LXA3 575 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 KRT71Q3SY84 523 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 TIGD2Q4W5G0 525 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 ODR4Q5SWX8 454 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 FAM122CQ6P4D5 195 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 ASRGL1Q7L266 308 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 MIER3Q7Z3K6 550 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 GLRX5Q86SX6 157 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 DGCR14Q96DF8 476 aaKnown RBP11.52□□□□□ -0.56
CDH3-203ENST00000542274 NOX5Q96PH1 765 aa11.52□□□□□ -0.56
CDH3-203ENST00000542274 TSGA13Q96PP4 275 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms