RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 ATXN8OSP0DMR3 200 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 CCND1P24385 295 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 GALNT4Q8N4A0 578 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 ZNF560Q96MR9 790 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.69■□□□□ 0.263e-6■□□□□ 10
VARS2-212ENST00000542001 FAM237BA0A1B0GVD1 139 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 TNPO2O14787 897 aaKnown RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 SHOX2O60902 331 aaPredicted RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 AP1G2O75843 785 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 SLC25A27O95847 323 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 PRAMEP78395 509 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 GAD2Q05329 585 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 LAMC2Q13753 1193 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 TAF1CQ15572 869 aaPredicted RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 PDCD2Q16342 344 aaPredicted RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 KIAA1841Q6NSI8 718 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 CDC26Q8NHZ8 85 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 TFB1MQ8WVM0 346 aaKnown RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 ALKBH8Q96BT7 664 aaKnown RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 LRGUKQ96M69 825 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 SRPK1Q96SB4 655 aaKnown RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 MAP3K20Q9NYL2 800 aaKnown RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 STXBP5LQ9Y2K9 1186 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 LRP6O75581 1613 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 SPATA31C2B4DYI2 1134 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 PPP1R12AO14974 1030 aaPredicted RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 ASS1P00966 412 aaKnown RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 SERPINB4P48594 390 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 PEX5P50542 639 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 FKBP1AP62942 108 aaKnown RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 BEX3Q00994 111 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 HIC1Q14526 733 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 RASA2Q15283 850 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 TRIP10Q15642 601 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 SLC1A5Q15758 541 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 CCDC117Q8IWD4 279 aaPredicted RBP16.69■□□□□ 0.26
VARS2-212ENST00000542001 C2orf69Q8N8R5 385 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 DNAJC9Q8WXX5 260 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 TSC22D3Q99576 134 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 TUBB6Q9BUF5 446 aa16.69■□□□□ 0.26
VARS2-212ENST00000542001 F7P08709 466 aaPredicted RBP16.68■□□□□ 0.26
VARS2-212ENST00000542001 TGM2P21980 687 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 FKBP1CQ5VVH2 108 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 TMEM154Q6P9G4 183 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 FOXP3Q9BZS1 431 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 RNPEPQ9H4A4 650 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 SHOC2Q9UQ13 582 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 NVLO15381 856 aaKnown RBP16.68■□□□□ 0.26
VARS2-212ENST00000542001 ZMPSTE24O75844 475 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 MMP8P22894 467 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 MGAT1P26572 445 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 SERPINB5P36952 375 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 DRG2P55039 364 aaKnown RBP16.68■□□□□ 0.26
VARS2-212ENST00000542001 ACCSLQ4AC99 568 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 ZPBP2Q6X784 338 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 SLC26A11Q86WA9 606 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 MIB1Q86YT6 1006 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 COLGALT1Q8NBJ5 622 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 ACO2Q99798 780 aaKnown RBP16.68■□□□□ 0.26
VARS2-212ENST00000542001 TTLL13PA6NNM8 815 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 C4BPAP04003 597 aaKnown RBP16.68■□□□□ 0.26
VARS2-212ENST00000542001 ADORA2AP29274 412 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 STX1BP61266 288 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 ITGA9Q13797 1035 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 LGMNQ99538 433 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 BARX2Q9UMQ3 279 aaPredicted RBP16.68■□□□□ 0.26
VARS2-212ENST00000542001 MYH7P12883 1935 aa16.68■□□□□ 0.26
VARS2-212ENST00000542001 AKAP11Q9UKA4 1901 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 ZNF536O15090 1300 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 hCG_1818297A0A087WSY0 165 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 NME5P56597 212 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 SLC39A4Q6P5W5 647 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 NOTUMQ6P988 496 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 FOXR2Q6PJQ5 311 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 FAM183BPQ6ZVS7 135 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 DEFB106AQ8N104 65 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 RIBC1Q8N443 379 aaPredicted RBP16.67■□□□□ 0.26
VARS2-212ENST00000542001 MIPOL1Q8TD10 442 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 VPS39Q96JC1 886 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 PTPRHQ9HD43 1115 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 hCG_2014768A0A024R1R8 64 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 TMEM191CA6NGB0 347 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 LSM8O95777 96 aaKnown RBP16.67■□□□□ 0.26
VARS2-212ENST00000542001 PLIN5Q00G26 463 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 DGKDQ16760 1214 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 HSP90AA5PQ58FG0 334 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 CNPY4Q8N129 248 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 DNERQ8NFT8 737 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 MTFR1LQ9H019 292 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 CHST12Q9NRB3 414 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 SLC12A6Q9UHW9 1150 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 FCHO1O14526 889 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 CYB561D2O14569 222 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 PDE5AO76074 875 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 POMCP01189 267 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 BTKQ06187 659 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 ANO4Q32M45 955 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 PTPRN2Q92932 1015 aa16.67■□□□□ 0.26
VARS2-212ENST00000542001 EPAS1Q99814 870 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms