RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 RAB27AP51159 221 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 OGDHQ02218 1023 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 KLF1Q13351 362 aaPredicted RBP6.87□□□□□ -1.31
VEGFB-203ENST00000541681 PDCLQ13371 301 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 CAMK1Q14012 370 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TERF2Q15554 542 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TRADDQ15628 312 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 SOWAHAQ2M3V2 549 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 GLIPR1L2Q4G1C9 344 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 PPP1R26Q5T8A7 1209 aaPredicted RBP6.87□□□□□ -1.31
VEGFB-203ENST00000541681 CYP4A22Q5TCH4 519 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TTC27Q6P3X3 843 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 DRICH1Q6PGQ1 229 aaPredicted RBP6.87□□□□□ -1.31
VEGFB-203ENST00000541681 ARCQ7LC44 396 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TMEM110Q86TL2 294 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 DDX42Q86XP3 938 aaKnown RBP eCLIP6.87□□□□□ -1.31
VEGFB-203ENST00000541681 ZDHHC17Q8IUH5 632 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 CCDC50Q8IVM0 306 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 LRRC43Q8N309 656 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TOP6BLQ8N6T0 577 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TSEN2Q8NCE0 465 aaKnown RBP6.87□□□□□ -1.31
VEGFB-203ENST00000541681 APPL2Q8NEU8 664 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 JOSD2Q8TAC2 188 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 SPPL3Q8TCT6 385 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 C18orf25Q96B23 403 aaPredicted RBP6.87□□□□□ -1.31
VEGFB-203ENST00000541681 GDAP1L1Q96MZ0 367 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 PPP1R10Q96QC0 940 aaKnown RBP6.87□□□□□ -1.31
VEGFB-203ENST00000541681 RUFY1Q96T51 708 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TCF25Q9BQ70 676 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 MRPL45Q9BRJ2 306 aaKnown RBP6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TRIM51Q9BSJ1 452 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 CNPY3Q9BT09 278 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 SLC4A5Q9BY07 1137 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 FRMD8P1Q9BZ68 369 aaPredicted RBP6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TSPYL1Q9H0U9 437 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 CXCL16Q9H2A7 254 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 RNF39Q9H2S5 420 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 PLEKHA4Q9H4M7 779 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TLR9Q9NR96 1032 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 RGS18Q9NS28 235 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TMEM161AQ9NX61 479 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 PSD3Q9NYI0 1048 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 WHRNQ9P202 907 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 HESX1Q9UBX0 185 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TUBGCP4Q9UGJ1 667 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 HMGXB4Q9UGU5 601 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 TSPAN16Q9UKR8 245 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 DRG1Q9Y295 367 aaKnown RBP6.87□□□□□ -1.31
VEGFB-203ENST00000541681 INPP5FQ9Y2H2 1132 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 GIT1Q9Y2X7 761 aa6.87□□□□□ -1.31
VEGFB-203ENST00000541681 DENND4CQ5VZ89 1909 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 PLXNA3P51805 1871 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 A8MXQ7 604 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 C9IYK1 514 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 GOLGA8SH3BPF8 625 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 PTGESO14684 152 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 NDC80O14777 642 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 PPEF2O14830 753 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 POLR3GO15318 223 aaPredicted RBP6.86□□□□□ -1.31
VEGFB-203ENST00000541681 HOXA2O43364 376 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 GPR37L1O60883 481 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 HUS1O60921 280 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 PPFIA2O75334 1257 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 GJB6O95452 261 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 GLP2RO95838 553 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 GAS8O95995 478 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 ERBB2P04626 1255 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 THP07101 528 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 SRGAP2BP0DMP2 458 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 RALAP11233 206 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 SKIP12755 728 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 DESP17661 470 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 WARSP23381 471 aaKnown RBP6.86□□□□□ -1.31
VEGFB-203ENST00000541681 RPL9P32969 192 aaKnown RBP6.86□□□□□ -1.31
VEGFB-203ENST00000541681 PCK1P35558 622 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 SSR1P43307 286 aaKnown RBP6.86□□□□□ -1.31
VEGFB-203ENST00000541681 ACADSBP45954 432 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 ZNF143P52747 638 aaPredicted RBP6.86□□□□□ -1.31
VEGFB-203ENST00000541681 LILRA4P59901 499 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 CAV1Q03135 178 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 SOX4Q06945 474 aaPredicted RBP6.86□□□□□ -1.31
VEGFB-203ENST00000541681 PTK6Q13882 451 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 COL19A1Q14993 1142 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 SMAD2Q15796 467 aaKnown RBP6.86□□□□□ -1.31
VEGFB-203ENST00000541681 TAZQ16635 292 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 CTC1Q2NKJ3 1217 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 ODF2Q5BJF6 829 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 TFDP3Q5H9I0 405 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 GLRA4Q5JXX5 417 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 SPOCD1Q6ZMY3 1216 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 FAM43BQ6ZT52 329 aaPredicted RBP6.86□□□□□ -1.31
VEGFB-203ENST00000541681 ACOT1Q86TX2 421 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 TMEM86AQ8N2M4 240 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 TMEM130Q8N3G9 435 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 EFHBQ8N7U6 833 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 ANKRD52Q8NB46 1076 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 TTC13Q8NBP0 860 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 BBOF1Q8ND07 529 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 OR6B3Q8NGW1 331 aa6.86□□□□□ -1.31
VEGFB-203ENST00000541681 UBA3Q8TBC4 463 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms