RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TRPC3Q13507 836 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 CA9Q16790 459 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 BSPRYQ5W0U4 402 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 UBR7Q8N806 425 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 PRPF31Q8WWY3 499 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 IFT43Q96FT9 208 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZNF184Q99676 751 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 PHACTR1Q9C0D0 580 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 EBF3Q9H4W6 596 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 MFHAS1Q9Y4C4 1052 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 ADGRA2Q96PE1 1338 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 ARHGAP42A6NI28 874 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 E7ESA3 106 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 SNUPNO95149 360 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 C1QAP02745 245 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 SKIP12755 728 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 ANPEPP15144 967 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 TFE3P19532 575 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 TBXAS1P24557 533 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 ABCG1P45844 678 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 RPL10AP62906 217 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 FAM102AQ5T9C2 384 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 IRGCQ6NXR0 463 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 PPP1R36Q96LQ0 422 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 GMLQ99445 158 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 SH3GL3Q99963 347 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 LPIN3Q9BQK8 851 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 NIF3L1Q9GZT8 377 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 PORCNQ9H237 461 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 STX18Q9P2W9 335 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZC3H7BQ9UGR2 993 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 USP18Q9UMW8 372 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 MAGED2Q9UNF1 606 aaPredicted RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 CNTN6Q9UQ52 1028 aa10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 MTO1Q9Y2Z2 717 aaKnown RBP10.78□□□□□ -0.68
CDC42SE1-207ENST00000540998 LOC100653049A0A140TA62 436 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 IQANK1A0A1B0GTG1 560 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 PLA2G6O60733 806 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 KRT34O76011 436 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 NPTXRO95502 500 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 APBA3O96018 575 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 HMGCRP04035 888 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 GTF2A2P52657 109 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 ATXN3P54252 364 aaPredicted RBP10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 MCCD1P59942 119 aaPredicted RBP10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 ROR1Q01973 937 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 AP1B1Q10567 949 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 OLIG2Q13516 323 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 PPP6R3Q5H9R7 873 aaPredicted RBP10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 EEF1DP3Q658K8 133 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 CWF19L1Q69YN2 538 aaKnown RBP10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 XYLT1Q86Y38 959 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 SCUBE1Q8IWY4 988 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 NDUFAF2Q8N183 169 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 RNF217Q8TC41 542 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 SLC7A3Q8WY07 619 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 ATXN7L3BQ96GX2 97 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZNF778Q96MU6 729 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZNF302Q9NR11 478 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 WDR35Q9P2L0 1181 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 PGAP2Q9UHJ9 254 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 AFG3L2Q9Y4W6 797 aa10.77□□□□□ -0.68
CDC42SE1-207ENST00000540998 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 CAPN14A8MX76 684 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 RFPL1O75677 317 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 SUPT20HL2P0C7V6 817 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 CXCL8P10145 99 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 MSX2P35548 267 aaPredicted RBP10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 OCRLQ01968 901 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 TMEM132BQ14DG7 1078 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 TMEM132AQ24JP5 1023 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 SUPT20HL1Q3ZLR7 823 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 CFAP157Q5JU67 520 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 TCHHL1Q5QJ38 904 aaPredicted RBP10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 LRRC38Q5VT99 294 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 CES3Q6UWW8 571 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 DLK2Q6UY11 383 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 CAND1Q86VP6 1230 aaKnown RBP10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 NUDCD3Q8IVD9 361 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 C12orf29Q8N999 325 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 E2F7Q96AV8 911 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 FGD4Q96M96 766 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 QTRT2Q9H974 415 aaKnown RBP10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 MYOCOSA0A1B0GUC4 107 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 M0QYV0 167 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 FAM189A1O60320 539 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 OATP04181 439 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 LYNP07948 512 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 RTP1P59025 263 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 CDC16Q13042 620 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 KCNJ11Q14654 390 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 XKR3Q5GH77 459 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 KRT27Q7Z3Y8 459 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 RNF149Q8NC42 400 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 PPFIBP2Q8ND30 876 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 SMC1BQ8NDV3 1235 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 GATA6Q92908 595 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 OXCT2Q9BYC2 517 aaPredicted RBP10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 XYLT2Q9H1B5 865 aa10.77□□□□□ -0.69
CDC42SE1-207ENST00000540998 C17orf75Q9HAS0 396 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms