RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 YJEFN3A6XGL0 299 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 NT5C1B-RDH14C9J2C7 533 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 E7ENQ6 273 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 TMEM189-UBE2V1I3L0A0 370 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 ECEL1O95672 775 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 AMHP03971 560 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 USP17L7P0C7H9 530 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 ETS1P14921 441 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 PECAM1P16284 738 aaPredicted RBP12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 TYMPP19971 482 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 ITGB8P26012 769 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 IVDP26440 423 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 SCNN1AP37088 669 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 PTPN9P43378 593 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 SLC11A1P49279 550 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 CDH6P55285 790 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 DPYSL3Q14195 570 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 UAP1Q16222 522 aaPredicted RBP12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 PKN2Q16513 984 aaKnown RBP12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 CCNG2Q16589 344 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 METTL23Q86XA0 190 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 KCTD6Q8NC69 237 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 SLCO2A1Q92959 643 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 GPR62Q9BZJ7 368 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 RAB17Q9H0T7 212 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 LRRC4Q9HBW1 653 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 CSNK1G1Q9HCP0 422 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 NAALADL1Q9UQQ1 740 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 ATP11BQ9Y2G3 1177 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 PCDHB7Q9Y5E2 793 aa12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.83□□□□□ -0.36
AP003559.1-201ENST00000540906 CST8O60676 142 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 DAB1O75553 588 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 ZSCAN5DPP0CG00 497 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 VPS41P49754 854 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 PGFP49763 221 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 DAOAP59103 153 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 COPS2P61201 443 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 TMCO2Q7Z6W1 182 aaPredicted RBP12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 FBXO25Q8TCJ0 367 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 MAIP1Q8WWC4 291 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 FAM149B1Q96BN6 582 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 SMARCD1Q96GM5 515 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 CCDC114Q96M63 670 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 PCDH18Q9HCL0 1135 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 FAM114A2Q9NRY5 505 aa12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 COL4A4P53420 1690 aaPredicted RBP12.82□□□□□ -0.36
AP003559.1-201ENST00000540906 SYNJ2BP-COX16A0A087WUM0 186 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 PRPSAP2O60256 369 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 TJP3O95049 919 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 SYF2O95926 243 aaKnown RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 CYP2F1P24903 491 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 OAS2P29728 719 aaKnown RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 HSPA9P38646 679 aaKnown RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 MATKP42679 507 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 GPR15P49685 360 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 SULT1E1P49888 294 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 NRLP54845 237 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 PLTPP55058 493 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 OTUD4Q01804 1114 aaKnown RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 YWHAHQ04917 246 aaPredicted RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 NNTQ13423 1086 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 PTK6Q13882 451 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 OASLQ15646 514 aaKnown RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 LRRC26Q2I0M4 334 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 BBS12Q6ZW61 710 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 BNIPLQ7Z465 357 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 RFX6Q8HWS3 928 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 NPAS4Q8IUM7 802 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 KRT222Q8N1A0 295 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 SIX6OS1Q8N1H7 587 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 PYROXD2Q8N2H3 581 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 PQLC3Q8N755 202 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 ADAM32Q8TC27 787 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 SPATA18Q8TC71 538 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 ACTL9Q8TC94 416 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 LRRN4Q8WUT4 740 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 SLC2A13Q96QE2 648 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 NPY6RQ99463 290 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 CALN1Q9BXU9 219 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 TXLNGYQ9BZA5 131 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 LRRC4CQ9HCJ2 640 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 ANLNQ9NQW6 1124 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 MTMR10Q9NXD2 777 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 COX16Q9P0S2 106 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 DSEQ9UL01 958 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 TBKBP1A7MCY6 615 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 DCDC2CA8MYV0 355 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 I6L893 689 aaPredicted RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 HSF2BPO75031 334 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 KLRC2P26717 231 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 GDF10P55107 478 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 FAM193AP78312 1265 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 PPP1R7Q15435 360 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 DCAF6Q58WW2 860 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 ODF2Q5BJF6 829 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 EFHC1Q5JVL4 640 aa12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 VARS2Q5ST30 1063 aaKnown RBP12.81□□□□□ -0.36
AP003559.1-201ENST00000540906 SDHAF4Q5VUM1 108 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms