RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 EP300Q09472 2414 aaPredicted RBP10.97□□□□□ -0.65
CDCA3-208ENST00000540683 PMM2O15305 246 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 TLR5O60602 858 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 RHOBTB1O94844 696 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 ZDHHC11BP0C7U3 371 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 TRIM49P0CI25 452 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 TRIM49CP0CI26 452 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 CCDC192P0DO97 292 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 ADH5P11766 374 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 TDGF1P13385 188 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 CD58P19256 250 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 ADORA2BP29275 332 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 GRIA2P42262 883 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 DPP6P42658 865 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 TNFRSF4P43489 277 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 PLA2G4AP47712 749 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 DGKEP52429 567 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 COG7P83436 770 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 ELF2Q15723 593 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 CCDC40Q4G0X9 1142 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 FSTL4Q6MZW2 842 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 TSSK4Q6SA08 328 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 FILIP1Q7Z7B0 1213 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 ADGRG2Q8IZP9 1017 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 EFCAB3Q8N7B9 438 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 ENGASEQ8NFI3 743 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 TAS1R2Q8TE23 839 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 GAB3Q8WWW8 586 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 DDX1Q92499 740 aaKnown RBP10.96□□□□□ -0.65
CDCA3-208ENST00000540683 TMEM176AQ96HP8 235 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 SLC22A12Q96S37 553 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 DUSP16Q9BY84 665 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 CYLDQ9NQC7 956 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 CISHQ9NSE2 258 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 OLA1Q9NTK5 396 aaKnown RBP10.96□□□□□ -0.65
CDCA3-208ENST00000540683 RBM12Q9NTZ6 932 aaKnown RBP10.96□□□□□ -0.65
CDCA3-208ENST00000540683 CLIC5Q9NZA1 410 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 WDR35Q9P2L0 1181 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 STRIP2Q9ULQ0 834 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 COQ4Q9Y3A0 265 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 PCDHGA5Q9Y5G8 931 aa10.96□□□□□ -0.65
CDCA3-208ENST00000540683 OTOGLQ3ZCN5 2332 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 FRYLO94915 3013 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 K7ESF4 209 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 COCHO43405 550 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 RNF40O75150 1001 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 RPP40O75818 363 aaKnown RBP10.95□□□□□ -0.66
CDCA3-208ENST00000540683 CCDC130P13994 396 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 ACO1P21399 889 aaKnown RBP10.95□□□□□ -0.66
CDCA3-208ENST00000540683 CHKAP35790 457 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 BCAT1P54687 386 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 ZNF445P59923 1031 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 PPP3CAQ08209 521 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 DHCR24Q15392 516 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 CCDC142Q17RM4 750 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 USP39Q53GS9 565 aaKnown RBP10.95□□□□□ -0.66
CDCA3-208ENST00000540683 SGO2Q562F6 1265 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 EOGTQ5NDL2 527 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 C1orf220Q5T0J3 134 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 SDE2Q6IQ49 451 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 CLEC20AQ6ZU45 233 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 HTR3DQ70Z44 454 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 CCDC186Q7Z3E2 898 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 ZC3H3Q8IXZ2 948 aaKnown RBP10.95□□□□□ -0.66
CDCA3-208ENST00000540683 KIAA2013Q8IYS2 634 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 RPLP0P6Q8NHW5 317 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 SCAMP5Q8TAC9 235 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 GOLGA1Q92805 767 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 NT5C1BQ96P26 610 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 TRIM62Q9BVG3 475 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 RNF38Q9H0F5 515 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 SDCBP2Q9H190 292 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 POLMQ9NP87 494 aaPredicted RBP10.95□□□□□ -0.66
CDCA3-208ENST00000540683 FAM49BQ9NUQ9 324 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 SMPD4Q9NXE4 827 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 GMIPQ9P107 970 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 DEC1Q9P2X7 70 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 CHORDC1Q9UHD1 332 aaPredicted RBP10.95□□□□□ -0.66
CDCA3-208ENST00000540683 CDV3Q9UKY7 258 aaKnown RBP10.95□□□□□ -0.66
CDCA3-208ENST00000540683 USP18Q9UMW8 372 aa10.95□□□□□ -0.66
CDCA3-208ENST00000540683 SPTBN4Q9H254 2564 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 NPC1O15118 1278 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 AXIN1O15169 862 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 HOXC11O43248 304 aaPredicted RBP10.94□□□□□ -0.66
CDCA3-208ENST00000540683 EGFP01133 1207 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 FNTBP49356 437 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 KIF11P52732 1056 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 UBE2HP62256 183 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 CUL2Q13617 745 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 DMC1Q14565 340 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 ARHGAP17Q68EM7 881 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 ANKRD40Q6AI12 368 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 SCARA3Q6AZY7 606 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 SPOPLQ6IQ16 392 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 Q6ZS52 159 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 PAQR9Q6ZVX9 377 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 RSRC2Q7L4I2 434 aaKnown RBP10.94□□□□□ -0.66
CDCA3-208ENST00000540683 C12orf29Q8N999 325 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 ANKRD52Q8NB46 1076 aa10.94□□□□□ -0.66
CDCA3-208ENST00000540683 TSTD1Q8NFU3 115 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms