RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 HOXC13P31276 330 aa22.14■■□□□ 1.13
CHFR-217ENST00000540537 EIF2DP41214 584 aaKnown RBP22.14■■□□□ 1.13
CHFR-217ENST00000540537 PPP1R2P41236 205 aa22.14■■□□□ 1.13
CHFR-217ENST00000540537 SRSF5Q13243 272 aaKnown RBP22.14■■□□□ 1.13
CHFR-217ENST00000540537 LPAL2Q16609 132 aa22.14■■□□□ 1.13
CHFR-217ENST00000540537 CBWD6Q4V339 395 aa22.14■■□□□ 1.13
CHFR-217ENST00000540537 CBWD3Q5JTY5 395 aa22.14■■□□□ 1.13
CHFR-217ENST00000540537 CBWD5Q5RIA9 395 aa22.14■■□□□ 1.13
CHFR-217ENST00000540537 SYT13Q7L8C5 426 aa22.14■■□□□ 1.13
CHFR-217ENST00000540537 NACA2Q9H009 215 aa22.14■■□□□ 1.13
CHFR-217ENST00000540537 CISHQ9NSE2 258 aa22.14■■□□□ 1.13
CHFR-217ENST00000540537 COQ4Q9Y3A0 265 aa22.14■■□□□ 1.13
CHFR-217ENST00000540537 TRIM49BA6NDI0 452 aa22.13■■□□□ 1.13
CHFR-217ENST00000540537 SCAMP3O14828 347 aaKnown RBP22.13■■□□□ 1.13
CHFR-217ENST00000540537 RETP07949 1114 aa22.13■■□□□ 1.13
CHFR-217ENST00000540537 PGFP49763 221 aa22.13■■□□□ 1.13
CHFR-217ENST00000540537 PPP1R26Q5T8A7 1209 aaPredicted RBP22.13■■□□□ 1.13
CHFR-217ENST00000540537 RHBDF2Q6PJF5 856 aa22.13■■□□□ 1.13
CHFR-217ENST00000540537 JAKMIP2Q96AA8 810 aa22.13■■□□□ 1.13
CHFR-217ENST00000540537 RMDN1Q96DB5 314 aa22.13■■□□□ 1.13
CHFR-217ENST00000540537 DHTKD1Q96HY7 919 aaPredicted RBP22.13■■□□□ 1.13
CHFR-217ENST00000540537 DUSP16Q9BY84 665 aa22.13■■□□□ 1.13
CHFR-217ENST00000540537 CYLDQ9NQC7 956 aa22.13■■□□□ 1.13
CHFR-217ENST00000540537 ARMCX3Q9UH62 379 aaPredicted RBP22.13■■□□□ 1.13
CHFR-217ENST00000540537 CYP26A1O43174 497 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 LRP3O75074 770 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 ADH5P11766 374 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 ACO1P21399 889 aaKnown RBP22.12■■□□□ 1.13
CHFR-217ENST00000540537 TGM1P22735 817 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 FOXK2Q01167 660 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 ZNF394Q53GI3 561 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 CEP68Q76N32 757 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.12■■□□□ 1.13
CHFR-217ENST00000540537 SLC4A11Q8NBS3 891 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 USP33Q8TEY7 942 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 TMEM176AQ96HP8 235 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 HEXIM2Q96MH2 286 aaKnown RBP22.12■■□□□ 1.13
CHFR-217ENST00000540537 ARID3AQ99856 593 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 MAN1B1Q9UKM7 699 aa22.12■■□□□ 1.13
CHFR-217ENST00000540537 CACNA1AO00555 2505 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 K7EQS6 105 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 PXNP49023 591 aaPredicted RBP22.11■■□□□ 1.13
CHFR-217ENST00000540537 KIF11P52732 1056 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 RAD23BP54727 409 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 DMC1Q14565 340 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 LY6G5CQ5SRR4 150 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 ARHGAP17Q68EM7 881 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 ERMP1Q7Z2K6 904 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 GAB3Q8WWW8 586 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 TATDN2Q93075 761 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 SLC35C1Q96A29 364 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 CEP63Q96MT8 703 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 HHIPQ96QV1 700 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 PNKPQ96T60 521 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 KLF16Q9BXK1 252 aaPredicted RBP22.11■■□□□ 1.13
CHFR-217ENST00000540537 METTL14Q9HCE5 456 aaKnown RBP22.11■■□□□ 1.13
CHFR-217ENST00000540537 PARD6AQ9NPB6 346 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 POLR3BQ9NW08 1133 aaPredicted RBP22.11■■□□□ 1.13
CHFR-217ENST00000540537 OSER1Q9NX31 292 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 USP18Q9UMW8 372 aa22.11■■□□□ 1.13
CHFR-217ENST00000540537 EML5Q05BV3 1969 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 SDK1Q7Z5N4 2213 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.1■■□□□ 1.13
CHFR-217ENST00000540537 RPP40O75818 363 aaKnown RBP22.1■■□□□ 1.13
CHFR-217ENST00000540537 TBX18O95935 607 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 ATP5C1P36542 298 aaKnown RBP22.1■■□□□ 1.13
CHFR-217ENST00000540537 LMNB2Q03252 620 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 GAD2Q05329 585 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 RALGAPA1Q6GYQ0 2036 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 KLHDC10Q6PID8 442 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 CCDC186Q7Z3E2 898 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 C12orf40Q86WS4 652 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 BBS7Q8IWZ6 715 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 UBXN6Q9BZV1 441 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 NMUR1Q9HB89 426 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 CIZ1Q9ULV3 898 aaPredicted RBP22.1■■□□□ 1.13
CHFR-217ENST00000540537 USP3Q9Y6I4 520 aa22.1■■□□□ 1.13
CHFR-217ENST00000540537 A0A1W2PQH9 124 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 PRR5-ARHGAP8B1AHC4 643 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 GREM1O60565 184 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 APBB3O95704 486 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 APODP05090 189 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 IRF1P10914 325 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 CD44P16070 742 aaKnown RBP22.09■■□□□ 1.13
CHFR-217ENST00000540537 SLC6A11P48066 632 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 PSEN1P49768 467 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 SEC13P55735 322 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 YWHAEP62258 255 aaKnown RBP22.09■■□□□ 1.13
CHFR-217ENST00000540537 ARHGAP8P85298 464 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 GOLGA8FQ08AF8 430 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 GOLGA8DPQ0D2H9 430 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 CUL2Q13617 745 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 PUM1Q14671 1186 aaKnown RBP eCLIP22.09■■□□□ 1.13
CHFR-217ENST00000540537 ISM2Q6H9L7 571 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 FOXR2Q6PJQ5 311 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 HTR3DQ70Z44 454 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 FAM160A2Q8N612 972 aaPredicted RBP22.09■■□□□ 1.13
CHFR-217ENST00000540537 WBP2Q969T9 261 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.09■■□□□ 1.13
CHFR-217ENST00000540537 DLL3Q9NYJ7 618 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms