RNA–Protein interactions for RNA: ENST00000540080.5

CLTA-210, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-210ENST00000540080 FHOD1Q9Y613 1164 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 PIAS3Q9Y6X2 628 aa24.27■■□□□ 1.48
CLTA-210ENST00000540080 MED7O43513 233 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 TBX18O95935 607 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 COL9A1P20849 921 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 RGS7P49802 495 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 SLC35F5Q8WV83 523 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 ZNF606Q8WXB4 792 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 NDRG1Q92597 394 aaKnown RBP24.26■■□□□ 1.47
CLTA-210ENST00000540080 ULBP1Q9BZM6 244 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 EBF3Q9H4W6 596 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 DUS2Q9NX74 493 aaKnown RBP24.26■■□□□ 1.47
CLTA-210ENST00000540080 RAPGEFL1Q9UHV5 662 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 NUDT5Q9UKK9 219 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 WNT6Q9Y6F9 365 aa24.26■■□□□ 1.47
CLTA-210ENST00000540080 TICRRQ7Z2Z1 1910 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 KANSL1LA0AUZ9 987 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 PIK3R2O00459 728 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 ZBED1O96006 694 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 RARGP13631 454 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 LCP1P13796 627 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 ARSAP15289 507 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 TCF3P15923 654 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 AOC1P19801 751 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 SOX9P48436 509 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 ADIGQ0VDE8 80 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 DRAP1Q14919 205 aaPredicted RBP24.25■■□□□ 1.47
CLTA-210ENST00000540080 ZSCAN23Q3MJ62 389 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 PMF1Q6P1K2 205 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 DENND1BQ6P3S1 775 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 ZNF852Q6ZMS4 543 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 SIX6OS1Q8N1H7 587 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 KCTD13Q8WZ19 329 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 DDX23Q9BUQ8 820 aaKnown RBP24.25■■□□□ 1.47
CLTA-210ENST00000540080 CYLDQ9NQC7 956 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 CFAP97Q9P2B7 532 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 SIT1Q9Y3P8 196 aa24.25■■□□□ 1.47
CLTA-210ENST00000540080 MTF2Q9Y483 593 aaPredicted RBP24.25■■□□□ 1.47
CLTA-210ENST00000540080 MYO16Q9Y6X6 1858 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 LRRC10BA6NIK2 292 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 LGALS16A8MUM7 142 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 SCAMP3O14828 347 aaKnown RBP24.24■■□□□ 1.47
CLTA-210ENST00000540080 UCHL3P15374 230 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 ATP5C1P36542 298 aaKnown RBP24.24■■□□□ 1.47
CLTA-210ENST00000540080 PSEN1P49768 467 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 UBXN1Q04323 297 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 UBXN2BQ14CS0 331 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 PDGFRLQ15198 375 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 ITPRIPL2Q3MIP1 535 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 APTXQ7Z2E3 356 aaKnown RBP24.24■■□□□ 1.47
CLTA-210ENST00000540080 OSCP1Q8WVF1 389 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 PCMTD1Q96MG8 357 aaPredicted RBP24.24■■□□□ 1.47
CLTA-210ENST00000540080 LINC00597Q9H2U6 94 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 HPS4Q9NQG7 708 aa24.24■■□□□ 1.47
CLTA-210ENST00000540080 FAM207AQ9NSI2 230 aaPredicted RBP24.24■■□□□ 1.47
CLTA-210ENST00000540080 MTPAPQ9NVV4 582 aaKnown RBP eCLIP24.24■■□□□ 1.47
CLTA-210ENST00000540080 SHISA7A6NL88 538 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 FAM170BA6NMN3 283 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 GABBR2O75899 941 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 DCNP07585 359 aaKnown RBP24.23■■□□□ 1.47
CLTA-210ENST00000540080 RALAP11233 206 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 CLCN1P35523 988 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 IFNAR2P48551 515 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 YWHAGP61981 247 aaKnown RBP eCLIP24.23■■□□□ 1.47
CLTA-210ENST00000540080 PTK2Q05397 1052 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 RUNX3Q13761 415 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 SYCP1Q15431 976 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 C10orf120Q5SQS8 335 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 PM20D1Q6GTS8 502 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 ARHGAP18Q8N392 663 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 ZFRQ96KR1 1074 aaKnown RBP24.23■■□□□ 1.47
CLTA-210ENST00000540080 NAA15Q9BXJ9 866 aaKnown RBP24.23■■□□□ 1.47
CLTA-210ENST00000540080 PLCB1Q9NQ66 1216 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 NDRG2Q9UN36 371 aaKnown RBP24.23■■□□□ 1.47
CLTA-210ENST00000540080 HCN4Q9Y3Q4 1203 aa24.23■■□□□ 1.47
CLTA-210ENST00000540080 OTOL1A6NHN0 477 aaPredicted RBP24.22■■□□□ 1.47
CLTA-210ENST00000540080 MAN2B1O00754 1011 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 MDM4O15151 490 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 IRF1P10914 325 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 GLULP15104 373 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 GPD2P43304 727 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 IQCB1Q15051 598 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 SLC47A2Q86VL8 602 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 DDX42Q86XP3 938 aaKnown RBP eCLIP24.22■■□□□ 1.47
CLTA-210ENST00000540080 FAM71AQ8IYT1 594 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 PJA1Q8NG27 643 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 FAM3CQ92520 227 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 C8orf33Q9H7E9 229 aaPredicted RBP24.22■■□□□ 1.47
CLTA-210ENST00000540080 CBX8Q9HC52 389 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 LTB4R2Q9NPC1 389 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 CLIC5Q9NZA1 410 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 SIK3Q9Y2K2 1263 aa24.22■■□□□ 1.47
CLTA-210ENST00000540080 MRPS17Q9Y2R5 130 aaKnown RBP24.22■■□□□ 1.47
CLTA-210ENST00000540080 COL4A2P08572 1712 aa24.21■■□□□ 1.47
CLTA-210ENST00000540080 SPECC1L-ADORA2AF8WAN1 911 aa24.21■■□□□ 1.47
CLTA-210ENST00000540080 MLLT6P55198 1093 aaPredicted RBP24.21■■□□□ 1.47
CLTA-210ENST00000540080 POLR2FP61218 127 aaKnown RBP24.21■■□□□ 1.47
CLTA-210ENST00000540080 EML3Q32P44 896 aa24.21■■□□□ 1.47
CLTA-210ENST00000540080 TADA2BQ86TJ2 420 aa24.21■■□□□ 1.47
CLTA-210ENST00000540080 HSFY1Q96LI6 401 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms