RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 MTRF1LQ9UGC7 380 aaKnown RBP23.45■■□□□ 1.35
HOMER3-204ENST00000539827 DSEQ9UL01 958 aa23.45■■□□□ 1.35
HOMER3-204ENST00000539827 PPFIA2O75334 1257 aa23.45■■□□□ 1.34
HOMER3-204ENST00000539827 OR1G1P47890 313 aa23.45■■□□□ 1.34
HOMER3-204ENST00000539827 INTS6LQ5JSJ4 861 aaKnown RBP23.45■■□□□ 1.34
HOMER3-204ENST00000539827 OVOS1Q6IE37 1185 aa23.45■■□□□ 1.34
HOMER3-204ENST00000539827 ARCQ7LC44 396 aa23.45■■□□□ 1.34
HOMER3-204ENST00000539827 GPRIN1Q7Z2K8 1008 aa23.45■■□□□ 1.34
HOMER3-204ENST00000539827 OR10T2Q8NGX3 314 aa23.45■■□□□ 1.34
HOMER3-204ENST00000539827 CENPIQ92674 756 aaPredicted RBP23.45■■□□□ 1.34
HOMER3-204ENST00000539827 MAK16Q9BXY0 300 aaKnown RBP23.45■■□□□ 1.34
HOMER3-204ENST00000539827 ULBP1Q9BZM6 244 aa23.45■■□□□ 1.34
HOMER3-204ENST00000539827 OGDHLQ9ULD0 1010 aa23.45■■□□□ 1.34
HOMER3-204ENST00000539827 DRG1Q9Y295 367 aaKnown RBP23.45■■□□□ 1.34
HOMER3-204ENST00000539827 ETS1P14921 441 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 LMNB2Q03252 620 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 RNASELQ05823 741 aaKnown RBP23.44■■□□□ 1.34
HOMER3-204ENST00000539827 DSC1Q08554 894 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 TCTN1Q2MV58 587 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 PLEKHG4Q58EX7 1191 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 HFE2Q6ZVN8 426 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 COLGALT2Q8IYK4 626 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 GLIS1Q8NBF1 620 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 SPATA18Q8TC71 538 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 SH3GL2Q99962 352 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 C10orf88Q9H8K7 445 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 TMEM161AQ9NX61 479 aa23.44■■□□□ 1.34
HOMER3-204ENST00000539827 OPA1O60313 960 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 DAB1O75553 588 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 CAPN15O75808 1086 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 ZSCAN5DPP0CG00 497 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 ITIH2P19823 946 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 PAX3P23760 479 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 KLRC2P26717 231 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 MATKP42679 507 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 SULT1E1P49888 294 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 ITGA8P53708 1063 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 MTMR3Q13615 1198 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 OASLQ15646 514 aaKnown RBP23.43■■□□□ 1.34
HOMER3-204ENST00000539827 FAM171BQ6P995 826 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 LRRTM3Q86VH5 581 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 THEM5Q8N1Q8 247 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 ALLCQ8N6M5 410 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 OR2W6PQ8NHA6 318 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 SLC35B2Q8TB61 432 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 TEKT4Q8WW24 435 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 NCAPGQ9BPX3 1015 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 PCDH18Q9HCL0 1135 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 DNAJB4Q9UDY4 337 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 PRG3Q9Y2Y8 225 aaPredicted RBP23.43■■□□□ 1.34
HOMER3-204ENST00000539827 NRP1O14786 923 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 PECAM1P16284 738 aaPredicted RBP23.43■■□□□ 1.34
HOMER3-204ENST00000539827 BDNFP23560 247 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 GATMP50440 423 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 NPNTQ6UXI9 565 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 CTU1Q7Z7A3 348 aaKnown RBP23.43■■□□□ 1.34
HOMER3-204ENST00000539827 GOLGA6L1Q8N7Z2 621 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 TTC13Q8NBP0 860 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 NKD2Q969F2 451 aaPredicted RBP23.43■■□□□ 1.34
HOMER3-204ENST00000539827 ARL8AQ96BM9 186 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 SMARCD1Q96GM5 515 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 FAM193BQ96PV7 902 aaPredicted RBP23.43■■□□□ 1.34
HOMER3-204ENST00000539827 TMEM121Q9BTD3 319 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 MAGEB5Q9BZ81 275 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 CALCOCO1Q9P1Z2 691 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 PCDHB8Q9UN66 801 aa23.43■■□□□ 1.34
HOMER3-204ENST00000539827 TP73O15350 636 aa23.42■■□□□ 1.34
HOMER3-204ENST00000539827 PMS2P54278 862 aa23.42■■□□□ 1.34
HOMER3-204ENST00000539827 YWHAZP63104 245 aaKnown RBP23.42■■□□□ 1.34
HOMER3-204ENST00000539827 PITX1P78337 314 aaPredicted RBP23.42■■□□□ 1.34
HOMER3-204ENST00000539827 PDK2Q15119 407 aa23.42■■□□□ 1.34
HOMER3-204ENST00000539827 DCAF6Q58WW2 860 aa23.42■■□□□ 1.34
HOMER3-204ENST00000539827 CCDC89Q8N998 374 aa23.42■■□□□ 1.34
HOMER3-204ENST00000539827 SCLYQ96I15 445 aa23.42■■□□□ 1.34
HOMER3-204ENST00000539827 PKMYT1Q99640 499 aa23.42■■□□□ 1.34
HOMER3-204ENST00000539827 ANAPC5Q9UJX4 755 aa23.42■■□□□ 1.34
HOMER3-204ENST00000539827 PCDHB7Q9Y5E2 793 aa23.42■■□□□ 1.34
HOMER3-204ENST00000539827 HHLA1C9JL84 531 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 TYMPP19971 482 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 ERMARDQ5T6L9 678 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 MAP7D3Q8IWC1 876 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 SEPT8Q92599 483 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 RNF157Q96PX1 679 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 KANSL3Q9P2N6 904 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 H0YGN5 161 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 ITGAVP06756 1048 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 USP17L7P0C7H9 530 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 IL4RP24394 825 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 DAOAP59103 153 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 IZUMO3Q5VZ72 239 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 RHBDF2Q6PJF5 856 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 CCDC25Q86WR0 208 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 CCDC185Q8N715 623 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 NFS1Q9Y697 457 aa23.41■■□□□ 1.34
HOMER3-204ENST00000539827 BRCA2P51587 3418 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 SYNJ2BP-COX16A0A087WUM0 186 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 ARHGEF37A1IGU5 675 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 APOC4-APOC2K7ER74 178 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 SGK1O00141 431 aa23.4■■□□□ 1.34
HOMER3-204ENST00000539827 MDM4O15151 490 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms