RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 DUSP16Q9BY84 665 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 GTPBP4Q9BZE4 634 aaKnown RBP17.72■□□□□ 0.43
DDB1-215ENST00000539712 FBXO44Q9H4M3 255 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 PNPLA8Q9NP80 782 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 CYLDQ9NQC7 956 aa17.72■□□□□ 0.43
DDB1-215ENST00000539712 HOOK1Q9UJC3 728 aaKnown RBP17.72■□□□□ 0.43
DDB1-215ENST00000539712 MYO16Q9Y6X6 1858 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 CYP26A1O43174 497 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 TLR5O60602 858 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 SLC6A11P48066 632 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 PXNP49023 591 aaPredicted RBP17.71■□□□□ 0.43
DDB1-215ENST00000539712 KIF11P52732 1056 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 FBXO43Q4G163 708 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 DCAF17Q5H9S7 520 aaPredicted RBP17.71■□□□□ 0.43
DDB1-215ENST00000539712 SCD5Q86SK9 330 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 WDR5BQ86VZ2 330 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 DDX42Q86XP3 938 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDB1-215ENST00000539712 UBR7Q8N806 425 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 CCDC150Q8NCX0 1101 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 JAKMIP2Q96AA8 810 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 HEXIM2Q96MH2 286 aaKnown RBP17.71■□□□□ 0.43
DDB1-215ENST00000539712 KLF16Q9BXK1 252 aaPredicted RBP17.71■□□□□ 0.43
DDB1-215ENST00000539712 ARMCX3Q9UH62 379 aaPredicted RBP17.71■□□□□ 0.43
DDB1-215ENST00000539712 CIZ1Q9ULV3 898 aaPredicted RBP17.71■□□□□ 0.43
DDB1-215ENST00000539712 USP3Q9Y6I4 520 aa17.71■□□□□ 0.43
DDB1-215ENST00000539712 SDK1Q7Z5N4 2213 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 SLC9A3R1O14745 358 aaPredicted RBP17.7■□□□□ 0.42
DDB1-215ENST00000539712 PSMA7O14818 248 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 ATG13O75143 517 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 ACO1P21399 889 aaKnown RBP17.7■□□□□ 0.42
DDB1-215ENST00000539712 LPAL2Q16609 132 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 TCERG1LQ5VWI1 586 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 C12orf40Q86WS4 652 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 BBS7Q8IWZ6 715 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 RPLP0P6Q8NHW5 317 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 TMEM176AQ96HP8 235 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 FAM124BQ9H5Z6 455 aaPredicted RBP17.7■□□□□ 0.42
DDB1-215ENST00000539712 PARD6AQ9NPB6 346 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 TLR8Q9NR97 1041 aaKnown RBP17.7■□□□□ 0.42
DDB1-215ENST00000539712 KIAA1549LQ6ZVL6 1849 aa17.7■□□□□ 0.42
DDB1-215ENST00000539712 A0A0A0MRY4 1105 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 A0A1W2PQH9 124 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 CNR2P34972 360 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 CUL2Q13617 745 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 LY6G5CQ5SRR4 150 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 ARHGAP17Q68EM7 881 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 FOXR2Q6PJQ5 311 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 SYT13Q7L8C5 426 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 PHTF2Q8N3S3 785 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 TTC39CQ8N584 583 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 USP33Q8TEY7 942 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 RMDN1Q96DB5 314 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 CEP63Q96MT8 703 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 HINFPQ9BQA5 517 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDB1-215ENST00000539712 TBC1D14Q9P2M4 693 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 NCDNQ9UBB6 729 aa17.69■□□□□ 0.42
DDB1-215ENST00000539712 CCDC163A0A0D9SF12 145 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 BIN1O00499 593 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 PMM2O15305 246 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 FMO5P49326 533 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 SIM2Q14190 667 aaPredicted RBP17.68■□□□□ 0.42
DDB1-215ENST00000539712 RAB41Q5JT25 222 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 LAIR1Q6GTX8 287 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 KLHL10Q6JEL2 608 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 HTR3DQ70Z44 454 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 CCDC186Q7Z3E2 898 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 TTC30AQ86WT1 665 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 TMEM25Q86YD3 366 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 ETFBKMTQ8IXQ9 262 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 ZNF276Q8N554 614 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 LMO3Q8TAP4 145 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 NELFBQ8WX92 580 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 EXOC4Q96A65 974 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 OTUB2Q96DC9 234 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 UBXN6Q9BZV1 441 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 METTL14Q9HCE5 456 aaKnown RBP17.68■□□□□ 0.42
DDB1-215ENST00000539712 NUDT5Q9UKK9 219 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 SLC8A2Q9UPR5 921 aa17.68■□□□□ 0.42
DDB1-215ENST00000539712 TULP2O00295 520 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 MDM4O15151 490 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 ADH5P11766 374 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 TRIM21P19474 475 aaKnown RBP17.67■□□□□ 0.42
DDB1-215ENST00000539712 EIF2DP41214 584 aaKnown RBP17.67■□□□□ 0.42
DDB1-215ENST00000539712 STIM1Q13586 685 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 KLHDC10Q6PID8 442 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 PRR23BQ6ZRT6 265 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 CAMKK1Q8N5S9 505 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 ANKRD52Q8NB46 1076 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 P2RY11Q96G91 374 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 HHIPQ96QV1 700 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 SH3BP1Q9Y3L3 701 aa17.67■□□□□ 0.42
DDB1-215ENST00000539712 EML5Q05BV3 1969 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 HOXC11O43248 304 aaPredicted RBP17.66■□□□□ 0.42
DDB1-215ENST00000539712 ADH1CP00326 375 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 IRF1P10914 325 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 RARGP13631 454 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 ATP5C1P36542 298 aaKnown RBP17.66■□□□□ 0.42
DDB1-215ENST00000539712 PPP1R2P41236 205 aa17.66■□□□□ 0.42
DDB1-215ENST00000539712 ID4P47928 161 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms