RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 CDC42EP4Q9H3Q1 356 aaKnown RBP10.62□□□□□ -0.71
SPARC-209ENST00000539687 CENPHQ9H3R5 247 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 DPEP3Q9H4B8 488 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 NGRNQ9NPE2 291 aaKnown RBP10.62□□□□□ -0.71
SPARC-209ENST00000539687 CNGB3Q9NQW8 809 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 DDX43Q9NXZ2 648 aaKnown RBP10.62□□□□□ -0.71
SPARC-209ENST00000539687 CALCOCO1Q9P1Z2 691 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 KANSL3Q9P2N6 904 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 TJP2Q9UDY2 1190 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 PCSK1NQ9UHG2 260 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 PADI3Q9ULW8 664 aa10.62□□□□□ -0.71
SPARC-209ENST00000539687 A0A087WUV0 522 aaPredicted RBP10.61□□□□□ -0.71
SPARC-209ENST00000539687 ARL5CA6NH57 179 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 AOC2O75106 756 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 CYP11A1P05108 521 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 PDGFRBP09619 1106 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 FGFR1P11362 822 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 CCDC130P13994 396 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 TCF4P15884 667 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 ATP2A2P16615 1042 aaKnown RBP10.61□□□□□ -0.71
SPARC-209ENST00000539687 CCND3P30281 292 aaPredicted RBP10.61□□□□□ -0.71
SPARC-209ENST00000539687 NOS2P35228 1153 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 PHBP35232 272 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 MAP2K2P36507 400 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 ACLYP53396 1101 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 ARL4CP56559 192 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 EIF3EP60228 445 aaKnown RBP10.61□□□□□ -0.71
SPARC-209ENST00000539687 GNGT1P63211 74 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 GPS1Q13098 491 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 DPYSL3Q14195 570 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 SLC29A2Q14542 456 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 DPYSL2Q16555 572 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 SLC25A52Q3SY17 297 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 KCNT1Q5JUK3 1230 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 TXNRD3NBQ6F5E7 133 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 PIGZQ86VD9 579 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 CCDC25Q86WR0 208 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 SPATS2Q86XZ4 545 aaKnown RBP10.61□□□□□ -0.71
SPARC-209ENST00000539687 SCUBE3Q8IX30 993 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 THEM5Q8N1Q8 247 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 SCML4Q8N228 414 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 URGCPQ8TCY9 931 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 IRGQQ8WZA9 623 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 TLCD1Q96CP7 247 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 FAF2Q96CS3 445 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 SMARCD1Q96GM5 515 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 RNF157Q96PX1 679 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 SYT15Q9BQS2 421 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 ACBD6Q9BR61 282 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 FAM107BQ9H098 131 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 PNPLA8Q9NP80 782 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 PAK5Q9P286 719 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 BCCIPQ9P287 314 aaKnown RBP eCLIP10.61□□□□□ -0.71
SPARC-209ENST00000539687 DOCK3Q8IZD9 2030 aa10.61□□□□□ -0.71
SPARC-209ENST00000539687 SF3B1O75533 1304 aaKnown RBP eCLIP10.6□□□□□ -0.713e-6■■■■■ 137.9
SPARC-209ENST00000539687 HACD1B0YJ81 288 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 H3BRJ5 948 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 SPAG6O75602 509 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 F9P00740 461 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 RBP3P10745 1247 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 PYGBP11216 843 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 LCP1P13796 627 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 TYMPP19971 482 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 LMO2P25791 158 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 ARL4AP40617 200 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 MDH1P40925 334 aaKnown RBP10.6□□□□□ -0.71
SPARC-209ENST00000539687 IRAK1P51617 712 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 GYS2P54840 703 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 BCAR1P56945 870 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 YWHAZP63104 245 aaKnown RBP10.6□□□□□ -0.71
SPARC-209ENST00000539687 MRPS5P82675 430 aaKnown RBP10.6□□□□□ -0.71
SPARC-209ENST00000539687 ATP11AP98196 1134 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 CBLBQ13191 982 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 LPIN1Q14693 890 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 RASA2Q15283 850 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 LLGL1Q15334 1064 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 ZSCAN26Q16670 478 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 UPP1Q16831 310 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 CDO1Q16878 200 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 RNASEH2BQ5TBB1 312 aaKnown RBP10.6□□□□□ -0.71
SPARC-209ENST00000539687 WSCD1Q658N2 575 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 KCTD16Q68DU8 428 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 SLC9A4Q6AI14 798 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 ASTLQ6HA08 431 aaPredicted RBP10.6□□□□□ -0.71
SPARC-209ENST00000539687 SCYL2Q6P3W7 929 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 DCLRE1AQ6PJP8 1040 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 AGMOQ6ZNB7 445 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 PDZD4Q76G19 769 aaPredicted RBP10.6□□□□□ -0.71
SPARC-209ENST00000539687 BEND5Q7L4P6 421 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 FUKQ8N0W3 1084 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 GSTCDQ8NEC7 633 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 MYCBPAPQ8TBZ2 947 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 CENPTQ96BT3 561 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 ZFP42Q96MM3 310 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 RBM15Q96T37 977 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPARC-209ENST00000539687 C11orf84Q9BUA3 381 aaPredicted RBP10.6□□□□□ -0.71
SPARC-209ENST00000539687 CXCL16Q9H2A7 254 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 EPB41L4BQ9H329 900 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 SEMA4AQ9H3S1 761 aa10.6□□□□□ -0.71
SPARC-209ENST00000539687 GOLGA2P5Q9HBQ8 144 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms