RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 CALCAP01258 141 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 PAEPP09466 180 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 IRF1P10914 325 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 GALK1P51570 392 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 BCAT1P54687 386 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 AMPD2Q01433 879 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 GCNT1Q02742 428 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 PDE4CQ08493 712 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 TPD52L1Q16890 204 aaPredicted RBP16.5■□□□□ 0.23
CIT-210ENST00000539413 RAB41Q5JT25 222 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 CCDC186Q7Z3E2 898 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 SCD5Q86SK9 330 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 ADGRG2Q8IZP9 1017 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 KIAA1958Q8N8K9 716 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 RBBP8NLQ8NC74 664 aaPredicted RBP16.5■□□□□ 0.23
CIT-210ENST00000539413 UBA3Q8TBC4 463 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 TFAP2BQ92481 460 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 KREMEN1Q96MU8 473 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 CRACR2AQ9BSW2 395 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.5■□□□□ 0.23
CIT-210ENST00000539413 HESX1Q9UBX0 185 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 DACH1Q9UI36 760 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 NAGPAQ9UK23 515 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 NUDT5Q9UKK9 219 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 KIAA1257Q9ULG3 409 aa16.5■□□□□ 0.23
CIT-210ENST00000539413 E2F8A0AVK6 867 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 XPO1O14980 1071 aaKnown RBP16.49■□□□□ 0.23
CIT-210ENST00000539413 MDM4O15151 490 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 EGFP01133 1207 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 CYP17A1P05093 508 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 RARGP13631 454 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 ERCC5P28715 1186 aaPredicted RBP16.49■□□□□ 0.23
CIT-210ENST00000539413 ATP5C1P36542 298 aaKnown RBP16.49■□□□□ 0.23
CIT-210ENST00000539413 MTIF2P46199 727 aaKnown RBP16.49■□□□□ 0.23
CIT-210ENST00000539413 SLC8A3P57103 927 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 SATB1Q01826 763 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 BST2Q10589 180 aaKnown RBP16.49■□□□□ 0.23
CIT-210ENST00000539413 GRSF1Q12849 480 aaKnown RBP eCLIP16.49■□□□□ 0.23
CIT-210ENST00000539413 NR1H3Q13133 447 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 GAB4Q2WGN9 574 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 ZNF528Q3MIS6 628 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 MAMSTRQ6ZN01 415 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 ASCL5Q7RTU5 278 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 P2RY13Q9BPV8 354 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 ZSWIM1Q9BR11 485 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 THAP9Q9H5L6 903 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 SH3BP1Q9Y3L3 701 aa16.49■□□□□ 0.23
CIT-210ENST00000539413 MYH10P35580 1976 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 SLC9A3R1O14745 358 aaPredicted RBP16.48■□□□□ 0.23
CIT-210ENST00000539413 GFRA3O60609 400 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 SLC9A1P19634 815 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 BRD2P25440 801 aaKnown RBP16.48■□□□□ 0.23
CIT-210ENST00000539413 PSEN1P49768 467 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 CCR3P51677 355 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 TKTL1P51854 596 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 ZNF132P52740 706 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 APBA1Q02410 837 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 DHCR24Q15392 516 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 PKDCCQ504Y2 493 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 HSP90AA4PQ58FG1 418 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 PKN3Q6P5Z2 889 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 TRIM65Q6PJ69 517 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 LCLAT1Q6UWP7 414 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 BBS7Q8IWZ6 715 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 SYNPOQ8N3V7 929 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 SPEM1Q8N4L4 309 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 EZH1Q92800 747 aaPredicted RBP16.48■□□□□ 0.23
CIT-210ENST00000539413 CD101Q93033 1021 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 NKD2Q969F2 451 aaPredicted RBP16.48■□□□□ 0.23
CIT-210ENST00000539413 KLF16Q9BXK1 252 aaPredicted RBP16.48■□□□□ 0.23
CIT-210ENST00000539413 UBE2TQ9NPD8 197 aaPredicted RBP16.48■□□□□ 0.23
CIT-210ENST00000539413 C2orf42Q9NWW7 574 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 TBC1D14Q9P2M4 693 aa16.48■□□□□ 0.23
CIT-210ENST00000539413 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.48■□□□□ 0.23
CIT-210ENST00000539413 PRR23AA6NEV1 266 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 GOLGA6L22H0YM25 854 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 SETSIPP0DME0 302 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 TDGF1P13385 188 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 DRD1P21728 446 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 OPRD1P41143 372 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 CXCL12P48061 93 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 C10orf120Q5SQS8 335 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 GJB7Q6PEY0 223 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 RHBDF2Q6PJF5 856 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 ZC3H14Q6PJT7 736 aaKnown RBP16.47■□□□□ 0.23
CIT-210ENST00000539413 RBM43Q6ZSC3 357 aaKnown RBP16.47■□□□□ 0.23
CIT-210ENST00000539413 NDRG1Q92597 394 aaKnown RBP16.47■□□□□ 0.23
CIT-210ENST00000539413 NELL1Q92832 810 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 ULBP1Q9BZM6 244 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 CLIC5Q9NZA1 410 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 DNMT3LQ9UJW3 386 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 CNTN6Q9UQ52 1028 aa16.47■□□□□ 0.23
CIT-210ENST00000539413 GREM1O60565 184 aa16.46■□□□□ 0.23
CIT-210ENST00000539413 RNF40O75150 1001 aa16.46■□□□□ 0.23
CIT-210ENST00000539413 ZBED1O96006 694 aa16.46■□□□□ 0.23
CIT-210ENST00000539413 RALAP11233 206 aa16.46■□□□□ 0.23
CIT-210ENST00000539413 KRT5P13647 590 aa16.46■□□□□ 0.23
CIT-210ENST00000539413 HOXC13P31276 330 aa16.46■□□□□ 0.23
CIT-210ENST00000539413 PLA2G4AP47712 749 aa16.46■□□□□ 0.23
CIT-210ENST00000539413 YWHAGP61981 247 aaKnown RBP eCLIP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms