RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 CDC23Q9UJX2 597 aa10.74□□□□□ -0.69
CLPB-210ENST00000539148 STAP1Q9ULZ2 295 aa10.74□□□□□ -0.69
CLPB-210ENST00000539148 SCML2Q9UQR0 700 aa10.74□□□□□ -0.69
CLPB-210ENST00000539148 PCDHA13Q9Y5I0 950 aa10.74□□□□□ -0.69
CLPB-210ENST00000539148 MTCH2Q9Y6C9 303 aa10.74□□□□□ -0.69
CLPB-210ENST00000539148 TRANK1O15050 2925 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 A0A0A6YYK5 440 aaPredicted RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 CCDC195A0A1B0GUA6 201 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 EPOPA6NHQ4 379 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 RFXAPO00287 272 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 PJA2O43164 708 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 SEC24AO95486 1093 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 SPATA31D3P0C874 917 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 FOSL2P15408 326 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 EPCAMP16422 314 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 PRLRP16471 622 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 DDX6P26196 483 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLPB-210ENST00000539148 GBP1P32455 592 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 RGS7P49802 495 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 GALCP54803 685 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 YWHAZP63104 245 aaKnown RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 MRPS5P82675 430 aaKnown RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 IFRD2Q12894 506 aaPredicted RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 ADAM15Q13444 863 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 ACAP1Q15027 740 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 ATAT1Q5SQI0 421 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 FAM102AQ5T9C2 384 aaPredicted RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 BTBD8Q5XKL5 378 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 LLGL2Q6P1M3 1020 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 SPATA31D4Q6ZUB0 917 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 PDZD4Q76G19 769 aaPredicted RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 SND1Q7KZF4 910 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLPB-210ENST00000539148 MON1BQ7L1V2 547 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 RSRC2Q7L4I2 434 aaKnown RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 SLC26A9Q7LBE3 791 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 DNAJB7Q7Z6W7 309 aaPredicted RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 GPIHBP1Q8IV16 184 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 SCUBE3Q8IX30 993 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 ZNF276Q8N554 614 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 WDTC1Q8N5D0 677 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 DEFB123Q8N688 67 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 ZMIZ2Q8NF64 920 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 SMG7Q92540 1137 aaKnown RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 PABPC5Q96DU9 382 aaKnown RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 NECTIN4Q96NY8 510 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 CPXM1Q96SM3 734 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 PCDHB18PQ96TA0 734 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 NACA2Q9H009 215 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 POPDC2Q9HBU9 364 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 CLIC5Q9NZA1 410 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 IL37Q9NZH6 218 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 CTTNBP2NLQ9P2B4 639 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 RNF14Q9UBS8 474 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 MAGED2Q9UNF1 606 aaPredicted RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 FAM50BQ9Y247 325 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 USP3Q9Y6I4 520 aa10.73□□□□□ -0.69
CLPB-210ENST00000539148 PRRC2BQ5JSZ5 2229 aaKnown RBP10.73□□□□□ -0.69
CLPB-210ENST00000539148 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 FAM92AA1XBS5 289 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 SIGLEC16A6NMB1 481 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 BTNL10A8MVZ5 291 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 MYO1FO00160 1098 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 TNFRSF10BO14763 440 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 ATP8B1O43520 1251 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 RNF8O76064 485 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 BEST1O76090 585 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 F9P00740 461 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 LTFP02788 710 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 ERBB2P04626 1255 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 ATF6P18850 670 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 ABCB4P21439 1286 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 SSTR3P32745 418 aaPredicted RBP10.72□□□□□ -0.69
CLPB-210ENST00000539148 ARHGAP25P42331 645 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 MTHFRP42898 656 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 NOP2P46087 812 aaKnown RBP10.72□□□□□ -0.69
CLPB-210ENST00000539148 TUBP50607 506 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 NAP1L1P55209 391 aaKnown RBP10.72□□□□□ -0.69
CLPB-210ENST00000539148 DAOAP59103 153 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 YWHAGP61981 247 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLPB-210ENST00000539148 CKAP4Q07065 602 aaKnown RBP10.72□□□□□ -0.69
CLPB-210ENST00000539148 HYAL1Q12794 435 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 PIGHQ14442 188 aaPredicted RBP10.72□□□□□ -0.69
CLPB-210ENST00000539148 PTPN20Q4JDL3 420 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 ZNF569Q5MCW4 686 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 EP400NLQ6ZTU2 488 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 ADGRD2Q7Z7M1 963 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 SYCE1Q8N0S2 351 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 GPR161Q8N6U8 529 aaKnown RBP10.72□□□□□ -0.69
CLPB-210ENST00000539148 VN1R2Q8NFZ6 395 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.72□□□□□ -0.69
CLPB-210ENST00000539148 GIPC2Q8TF65 315 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 RFFLQ8WZ73 363 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 MCRS1Q96EZ8 462 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 ULBP1Q9BZM6 244 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 LZTFL1Q9NQ48 299 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 CLDND1Q9NY35 253 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 IP6K2Q9UHH9 426 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 PCDHGC5Q9Y5F6 944 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 MRFAP1Q9Y605 127 aa10.72□□□□□ -0.69
CLPB-210ENST00000539148 OBSL1O75147 1896 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms