RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 C2orf71A6NGG8 1288 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 CHMP2AO43633 222 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 KLHL2O95198 593 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 KRT1P04264 644 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 ATF7P17544 494 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-209ENST00000538654 GJC1P36383 396 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 TMPRSS15P98073 1019 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 PLCB3Q01970 1234 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 FOLH1Q04609 750 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 DDB1Q16531 1140 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 LGSNQ5TDP6 509 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 KAZNQ674X7 775 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 KLHDC10Q6PID8 442 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 RHPN2Q8IUC4 686 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 CROCCP3Q8IVE0 287 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 FBXO36Q8NEA4 188 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 FBXO27Q8NI29 283 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 PLEKHO2Q8TD55 490 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 CPA5Q8WXQ8 436 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 NLRP4Q96MN2 994 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 RILPQ96NA2 401 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 KLF6Q99612 283 aaPredicted RBP9.38□□□□□ -0.91
SNHG1-209ENST00000538654 ST6GALNAC4Q9H4F1 302 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 STN1Q9H668 368 aaKnown RBP9.38□□□□□ -0.91
SNHG1-209ENST00000538654 BTG4Q9NY30 223 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 EXOC7Q9UPT5 735 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 MAD1L1Q9Y6D9 718 aa9.38□□□□□ -0.91
SNHG1-209ENST00000538654 CCDC160A6NGH7 325 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 C19orf81C9J6K1 198 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 TNFAIP8O95379 198 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 HLA-DOAP06340 250 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 SMIM18P0DKX4 95 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 IL1R1P14778 569 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ETS1P14921 441 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ABCD1P33897 745 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ZNF132P52740 706 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 HSD17B7P56937 341 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ZNF200P98182 395 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ENPEPQ07075 957 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 DLG1Q12959 904 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 PICALMQ13492 652 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 TRIP10Q15642 601 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 SNRNP35Q16560 246 aaKnown RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 TBC1D10BQ4KMP7 808 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 SLFN13Q68D06 897 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 MYPNQ86TC9 1320 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ARID3BQ8IVW6 561 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ZBTB8BQ8NAP8 495 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 CATSPER1Q8NEC5 780 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 GSTCDQ8NEC7 633 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 SLC44A1Q8WWI5 657 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 PYDC1Q8WXC3 89 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 MS4A4AQ96JQ5 239 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ACAP3Q96P50 834 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 C12orf65Q9H3J6 166 aaKnown RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 USP29Q9HBJ7 922 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 CD209Q9NNX6 404 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 C1orf112Q9NSG2 853 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 PAIP2BQ9ULR5 123 aaKnown RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 SH3GLB1Q9Y371 365 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 DNMT3AQ9Y6K1 912 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ZBTB39O15060 712 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 OR6B1O95007 311 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 IFNB1P01574 187 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 TM4SF1P30408 202 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 SHMT1P34896 483 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 CPOXP36551 454 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ETFBP38117 255 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ALDH18A1P54886 795 aaKnown RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 AQP5P55064 265 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 SNX16P57768 344 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 TBL3Q12788 808 aaKnown RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 MAMLD1Q13495 774 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 FXNQ16595 210 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 LRRC36Q1X8D7 754 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 TFDP3Q5H9I0 405 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 MFSD14BQ5SR56 506 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 LPCAT4Q643R3 524 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 PLEKHA7Q6IQ23 1121 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 PADI6Q6TGC4 694 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 SPOCD1Q6ZMY3 1216 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 DAW1Q8N136 415 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 AHI1Q8N157 1196 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 NUP93Q8N1F7 819 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 SLC25A41Q8N5S1 370 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 CYP2W1Q8TAV3 490 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 ZFPM2Q8WW38 1151 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 EMID1Q96A84 441 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 EHMT1Q9H9B1 1298 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 NGRNQ9NPE2 291 aaKnown RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 CREBZFQ9NS37 354 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 PARVAQ9NVD7 372 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 C6orf203Q9P0P8 240 aaPredicted RBP9.37□□□□□ -0.91
SNHG1-209ENST00000538654 RAB26Q9ULW5 256 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 WDR37Q9Y2I8 494 aa9.37□□□□□ -0.91
SNHG1-209ENST00000538654 A6NJY4 79 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 TTLL13PA6NNM8 815 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 PRR5-ARHGAP8B1AHC4 643 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 GOLGA8SH3BPF8 625 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 GOLGA8MH3BSY2 632 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms