RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SNAPC2Q13487 334 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 GRAMD1BQ3KR37 738 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 UNC45BQ8IWX7 931 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 CCDC33Q8N5R6 958 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 PPM1NQ8N819 430 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 RBM38Q9H0Z9 239 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 STN1Q9H668 368 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 THAP1Q9NVV9 213 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 ASTN2O75129 1339 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 SF3B1O75533 1304 aaKnown RBP eCLIP19.31■□□□□ 0.682e-7■■■■■ 215.4
SFSWAP-207ENST00000538548 hCG_2014768A0A024R1R8 64 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 HNRNPDLO14979 420 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 C1QAP02745 245 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 GARTP22102 1010 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 MTMR2Q13614 643 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 DPYSL3Q14195 570 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 TLR1Q15399 786 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 RABGAP1LQ5R372 815 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 OGFRL1Q5TC84 451 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 LMBRD2Q68DH5 695 aaPredicted RBP19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 ARCQ7LC44 396 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 CTAGE3PQ8IX95 158 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 CCDC124Q96CT7 223 aaKnown RBP19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 CNTN6Q9UQ52 1028 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 POMPQ9Y244 141 aa19.31■□□□□ 0.68
SFSWAP-207ENST00000538548 A0A0B4J269 797 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 RFPL1O75677 317 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 PDE5AO76074 875 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 BPGMP07738 259 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 TAP1Q03518 808 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 STX3Q13277 289 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 TUBB3Q13509 450 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 NADK2Q4G0N4 442 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 TDRD10Q5VZ19 366 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 ANO5Q75V66 913 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 SH3BP5LQ7L8J4 393 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 WDR75Q8IWA0 830 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 RTKN2Q8IZC4 609 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 FAM71DQ8N9W8 422 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 SLC13A1Q9BZW2 595 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 Q9H521 79 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 XAB2Q9HCS7 855 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 DMTF1Q9Y222 760 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 DTNAQ9Y4J8 743 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 STK10O94804 968 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 CDK4P11802 303 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 DOK7Q18PE1 504 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 C4orf19Q8IY42 314 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 GCNAQ96QF7 691 aa19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 MRPS26Q9BYN8 205 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-207ENST00000538548 RGPD3A6NKT7 1758 aaPredicted RBP19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 RGPD4Q7Z3J3 1758 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 CCDC160A6NGH7 325 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 GH2P01242 217 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 C4BPAP04003 597 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 PROCP04070 461 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 TNNI1P19237 187 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 CHRNA5P30532 468 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 SPP2Q13103 211 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 XKR9Q5GH70 373 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 KBTBD6Q86V97 674 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 METTL25Q8N6Q8 603 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 POU5F2Q8N7G0 328 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 APOBEC3GQ9HC16 384 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 DDX18Q9NVP1 670 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 LZTS1Q9Y250 596 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 INPP5FQ9Y2H2 1132 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 TTLL3Q9Y4R7 772 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 PCDHGA4Q9Y5G9 962 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 CAPN8A6NHC0 703 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 H3BNX3 289 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 CRKP46108 304 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 DBN1Q16643 649 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 ZNF606Q8WXB4 792 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 NTPCRQ9BSD7 190 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 FAM198AQ9UFP1 575 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 SYNPO2Q9UMS6 1093 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 APOBEC2Q9Y235 224 aaKnown RBP19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 LTBP1Q14766 1721 aa19.29■□□□□ 0.68
SFSWAP-207ENST00000538548 ARHGAP10A1A4S6 786 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 ATP6V1G1O75348 118 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 SORBS2O94875 1100 aaKnown RBP19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 PMLP29590 882 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 ALDH1A3P47895 512 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 ADARP55265 1226 aaKnown RBP19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 UGCGQ16739 394 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 WDR78Q5VTH9 848 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 DENND5BQ6ZUT9 1274 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 TRMT1LQ7Z2T5 733 aaKnown RBP19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 ZFP28Q8NHY6 868 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 PIWIL2Q8TC59 973 aaKnown RBP19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 CLMNQ96JQ2 1002 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 BLOC1S6Q9UL45 172 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 VNN1O95497 513 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 TBXAS1P24557 533 aaPredicted RBP19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 L1CAMP32004 1257 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 DCTN2Q13561 401 aaKnown RBP19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 KCNJ11Q14654 390 aa19.28■□□□□ 0.68
SFSWAP-207ENST00000538548 PSMD6Q15008 389 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms