RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 USP29Q9HBJ7 922 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 PCDH18Q9HCL0 1135 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 RAB6BQ9NRW1 208 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 HESX1Q9UBX0 185 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 SLC27A1Q6PCB7 646 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 LRRC8CQ8TDW0 803 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 CLEC4CQ8WTT0 213 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 MAML3Q96JK9 1138 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 PLCD4Q9BRC7 762 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 SLC4A5Q9BY07 1137 aa25.95■■□□□ 1.74
RAB40C-204ENST00000538492 NXF3Q9H4D5 531 aaKnown RBP25.95■■□□□ 1.74
RAB40C-204ENST00000538492 FGFR1P11362 822 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 BCAR1P56945 870 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 KCNJ2P63252 427 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 BNIP1Q12981 228 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 KCNJ11Q14654 390 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 BOLA3Q53S33 107 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 PNMA8AQ86V59 439 aaPredicted RBP25.94■■□□□ 1.74
RAB40C-204ENST00000538492 GBP7Q8N8V2 638 aaPredicted RBP25.94■■□□□ 1.74
RAB40C-204ENST00000538492 PCDH19Q8TAB3 1148 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 L3MBTL3Q96JM7 780 aaPredicted RBP25.94■■□□□ 1.74
RAB40C-204ENST00000538492 MS4A4AQ96JQ5 239 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 DHRS4Q9BTZ2 278 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 SPON1Q9HCB6 807 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 GJD2Q9UKL4 321 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 KBTBD13C9JR72 458 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 APOL1O14791 398 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 AKAP5P24588 427 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 RBL1P28749 1068 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 GBP2P32456 591 aaPredicted RBP25.94■■□□□ 1.74
RAB40C-204ENST00000538492 PDK2Q15119 407 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 TMEM110Q86TL2 294 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 FETUBQ9UGM5 382 aa25.94■■□□□ 1.74
RAB40C-204ENST00000538492 SMAPO00193 183 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 PDGFRBP09619 1106 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 ATP2A2P16615 1042 aaKnown RBP25.93■■□□□ 1.74
RAB40C-204ENST00000538492 ADRA1DP25100 572 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 YWHAGP61981 247 aaKnown RBP eCLIP25.93■■□□□ 1.74
RAB40C-204ENST00000538492 ACVR2BQ13705 512 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 ZNF467Q7Z7K2 595 aaPredicted RBP25.93■■□□□ 1.74
RAB40C-204ENST00000538492 FAM228AQ86W67 206 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 GCOM2Q9BZD3 368 aaPredicted RBP25.93■■□□□ 1.74
RAB40C-204ENST00000538492 FAM124BQ9H5Z6 455 aaPredicted RBP25.93■■□□□ 1.74
RAB40C-204ENST00000538492 PLEKHA5Q9HAU0 1116 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 DNAH12Q6ZR08 3092 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 WDR91A4D1P6 747 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 A8MXQ7 604 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 MGRN1O60291 552 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 ATXN1P54253 815 aaKnown RBP25.93■■□□□ 1.74
RAB40C-204ENST00000538492 HDAC4P56524 1084 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 SOWAHAQ2M3V2 549 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 RNF43Q68DV7 783 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 ANKLE1Q8NAG6 615 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 MZB1Q8WU39 189 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 TRIM6Q9C030 488 aaPredicted RBP25.93■■□□□ 1.74
RAB40C-204ENST00000538492 STARD13Q9Y3M8 1113 aa25.93■■□□□ 1.74
RAB40C-204ENST00000538492 TCRBV9S1A1TA0A576 114 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 DPYSL4O14531 572 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 CCDC130P13994 396 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 ADORA2BP29275 332 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 SESTD1Q86VW0 696 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 KIF2BQ8N4N8 673 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 BRI3BPQ8WY22 251 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 TINF2Q9BSI4 451 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 MAGEB5Q9BZ81 275 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 GPR32O75388 356 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 ZBED1O96006 694 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 ZBTB6Q15916 424 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 KBTBD12Q3ZCT8 623 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 AGGF1Q8N302 714 aaeCLIP25.92■■□□□ 1.74
RAB40C-204ENST00000538492 CCDC33Q8N5R6 958 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 BEST2Q8NFU1 509 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 CYTH2Q99418 400 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 TRIM33Q9UPN9 1127 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 TEX264Q9Y6I9 313 aa25.92■■□□□ 1.74
RAB40C-204ENST00000538492 RECQL4O94761 1208 aa25.91■■□□□ 1.74
RAB40C-204ENST00000538492 TCP10LQ8TDR4 215 aa25.91■■□□□ 1.74
RAB40C-204ENST00000538492 KLK14Q9P0G3 267 aa25.91■■□□□ 1.74
RAB40C-204ENST00000538492 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.91■■□□□ 1.74
RAB40C-204ENST00000538492 GTF2A1P52655 376 aaPredicted RBP25.91■■□□□ 1.74
RAB40C-204ENST00000538492 SEPT7Q16181 437 aaKnown RBP25.91■■□□□ 1.74
RAB40C-204ENST00000538492 C9orf57Q5W0N0 161 aa25.91■■□□□ 1.74
RAB40C-204ENST00000538492 ABHD16BQ9H3Z7 469 aa25.91■■□□□ 1.74
RAB40C-204ENST00000538492 PAK5Q9P286 719 aa25.91■■□□□ 1.74
RAB40C-204ENST00000538492 DERAQ9Y315 318 aa25.91■■□□□ 1.74
RAB40C-204ENST00000538492 CFAP73A6NFT4 308 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 IGF2BP3O00425 579 aaKnown RBP eCLIP25.9■■□□□ 1.74
RAB40C-204ENST00000538492 CHUKO15111 745 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 EDF1O60869 148 aaKnown RBP25.9■■□□□ 1.74
RAB40C-204ENST00000538492 ZWINTO95229 277 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 PRAMEF19Q5SWL8 479 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 NOTUMQ6P988 496 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 RGS9BPQ6ZS82 235 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 KLHL29Q96CT2 875 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 CFAP36Q96G28 342 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 SLC17A7Q9P2U7 560 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 BAIAP2L1Q9UHR4 511 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 CHADO15335 359 aa25.9■■□□□ 1.74
RAB40C-204ENST00000538492 DYNC1LI2O43237 492 aaPredicted RBP25.9■■□□□ 1.74
RAB40C-204ENST00000538492 HOXD8P13378 290 aaPredicted RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms