RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 IDEP14735 1019 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 CASP5P51878 434 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 FAM193AP78312 1265 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 SCAPQ12770 1279 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 WDR45BQ5MNZ6 344 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 C10orf76Q5T2E6 689 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 CCDC73Q6ZRK6 1079 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 USP49Q70CQ1 688 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 TRAPPC11Q7Z392 1133 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 TRIML1Q8N9V2 468 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 OR6B3Q8NGW1 331 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 NOC3LQ8WTT2 800 aaKnown RBP10.86□□□□□ -0.67
VPS37C-204ENST00000538036 ZFRQ96KR1 1074 aaKnown RBP10.86□□□□□ -0.67
VPS37C-204ENST00000538036 MRPL45Q9BRJ2 306 aaKnown RBP10.86□□□□□ -0.67
VPS37C-204ENST00000538036 PANK4Q9NVE7 773 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 IL37Q9NZH6 218 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 SMC3Q9UQE7 1217 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 APOBEC2Q9Y235 224 aaKnown RBP10.86□□□□□ -0.67
VPS37C-204ENST00000538036 NFE2L3Q9Y4A8 694 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.86□□□□□ -0.67
VPS37C-204ENST00000538036 SRPRBQ9Y5M8 271 aaKnown RBP10.86□□□□□ -0.67
VPS37C-204ENST00000538036 PTPRDP23468 1912 aa10.86□□□□□ -0.67
VPS37C-204ENST00000538036 ATP8B3O60423 1300 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 A0A1W2PQF6 199 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 GFRA2O00451 464 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 SCAMP3O14828 347 aaKnown RBP10.85□□□□□ -0.67
VPS37C-204ENST00000538036 SH3BP5O60239 455 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 NDUFS2O75306 463 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 STAU1O95793 577 aaKnown RBP10.85□□□□□ -0.67
VPS37C-204ENST00000538036 DEKP35659 375 aaKnown RBP10.85□□□□□ -0.67
VPS37C-204ENST00000538036 TNNC1P63316 161 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 ANO4Q32M45 955 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 PLEKHG6Q3KR16 790 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 WDR72Q3MJ13 1102 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 GRAMD4Q6IC98 578 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 CCNI2Q6ZMN8 369 aaPredicted RBP10.85□□□□□ -0.67
VPS37C-204ENST00000538036 HTR3DQ70Z44 454 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 GLRX5Q86SX6 157 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 METTL3Q86U44 580 aaKnown RBP10.85□□□□□ -0.67
VPS37C-204ENST00000538036 TMEM25Q86YD3 366 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 SLC41A1Q8IVJ1 513 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 CCDC65Q8IXS2 484 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 CHPFQ8IZ52 775 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 DEFB119Q8N690 84 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 NAT16Q8N8M0 369 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 B3GALNT2Q8NCR0 500 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 IPO4Q8TEX9 1081 aaKnown RBP10.85□□□□□ -0.67
VPS37C-204ENST00000538036 FBXO32Q969P5 355 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 FAM84AQ96KN4 292 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 HSPA12BQ96MM6 686 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 XPO6Q96QU8 1125 aaKnown RBP10.85□□□□□ -0.67
VPS37C-204ENST00000538036 GABRG3Q99928 467 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 ZNF518BQ9C0D4 1074 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 LRRC27Q9C0I9 530 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 CCDC86Q9H6F5 360 aaKnown RBP10.85□□□□□ -0.67
VPS37C-204ENST00000538036 ZDHHC4Q9NPG8 344 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 FSCN3Q9NQT6 498 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 KIAA1522Q9P206 1035 aaPredicted RBP10.85□□□□□ -0.67
VPS37C-204ENST00000538036 WDR35Q9P2L0 1181 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 PLXND1Q9Y4D7 1925 aa10.85□□□□□ -0.67
VPS37C-204ENST00000538036 PTPRJQ12913 1337 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 HELZP42694 1942 aaKnown RBP10.84□□□□□ -0.67
VPS37C-204ENST00000538036 FAM92AA1XBS5 289 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 A8MXQ7 604 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 CACNG3O60359 315 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 CST3P01034 146 aaPredicted RBP10.84□□□□□ -0.67
VPS37C-204ENST00000538036 ZDHHC11BP0C7U3 371 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 FTH1P19P0C7X4 201 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 TNNI1P19237 187 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 NDUFV2P19404 249 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 ATICP31939 592 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 ZNF132P52740 706 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 CACNA2D1P54289 1103 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 SNRPFP62306 86 aaKnown RBP10.84□□□□□ -0.67
VPS37C-204ENST00000538036 PDZD3Q86UT5 571 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 CBWD2Q8IUF1 395 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 NAXDQ8IW45 347 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 BBS7Q8IWZ6 715 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 RGL4Q8IZJ4 473 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 SCFD1Q8WVM8 642 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 TNIP3Q96KP6 325 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 B3GNT5Q9BYG0 378 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 NACA2Q9H009 215 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 CD248Q9HCU0 757 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.84□□□□□ -0.672e-6■■■■■ 122.6
VPS37C-204ENST00000538036 TMEM30AQ9NV96 361 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 HSPBP1Q9NZL4 362 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 CHORDC1Q9UHD1 332 aaPredicted RBP10.84□□□□□ -0.67
VPS37C-204ENST00000538036 FBXO2Q9UK22 296 aaPredicted RBP10.84□□□□□ -0.67
VPS37C-204ENST00000538036 HCN2Q9UL51 889 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 CYP8B1Q9UNU6 501 aa10.84□□□□□ -0.67
VPS37C-204ENST00000538036 TNRC6BQ9UPQ9 1833 aaKnown RBP10.84□□□□□ -0.67
VPS37C-204ENST00000538036 FREM2Q5SZK8 3169 aa10.83□□□□□ -0.68
VPS37C-204ENST00000538036 IGSF10Q6WRI0 2623 aa10.83□□□□□ -0.68
VPS37C-204ENST00000538036 NPC1O15118 1278 aa10.83□□□□□ -0.68
VPS37C-204ENST00000538036 ZNF883P0CG24 379 aa10.83□□□□□ -0.68
VPS37C-204ENST00000538036 DLATP10515 647 aaKnown RBP10.83□□□□□ -0.68
VPS37C-204ENST00000538036 STAT6P42226 847 aa10.83□□□□□ -0.68
VPS37C-204ENST00000538036 GOLGA8FQ08AF8 430 aa10.83□□□□□ -0.68
VPS37C-204ENST00000538036 GOLGA8DPQ0D2H9 430 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms