RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 MGARPQ8TDB4 240 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 SLC2A14Q8TDB8 520 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 PYROXD1Q8WU10 500 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 MAML1Q92585 1016 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 HSFY1Q96LI6 401 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 GOLGA2P5Q9HBQ8 144 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 ZFYVE28Q9HCC9 887 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 UBN1Q9NPG3 1134 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 SLC24A2Q9UI40 661 aa16.33■□□□□ 0.21
MKS1-204ENST00000537529 XPO7Q9UIA9 1087 aaKnown RBP16.33■□□□□ 0.21
MKS1-204ENST00000537529 RASA4BC9J798 803 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 E7ESA3 106 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 RASA4O43374 803 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 VIMP08670 466 aaKnown RBP16.33■□□□□ 0.2
MKS1-204ENST00000537529 LCP1P13796 627 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 CREB1P16220 341 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 TSHRP16473 764 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 LRPAP1P30533 357 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 HDAC4P56524 1084 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 BCAR1P56945 870 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 MRPS6P82932 125 aaKnown RBP16.33■□□□□ 0.2
MKS1-204ENST00000537529 RASA2Q15283 850 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 SLC9A4Q6AI14 798 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 PPP1R21Q6ZMI0 780 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 ANKMY2Q8IV38 441 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 PDIK1LQ8N165 341 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 PLD5Q8N7P1 536 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 ARRDC4Q8NCT1 418 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 CCDC197Q8NCU1 140 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 SAMD15Q9P1V8 674 aa16.33■□□□□ 0.2
MKS1-204ENST00000537529 TRIP11Q15643 1979 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 POC1B-GALNT4F8VUJ3 575 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 DUSP11O75319 330 aaKnown RBP16.32■□□□□ 0.2
MKS1-204ENST00000537529 IL4RP24394 825 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 GCAP28676 217 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 SLC8A3P57103 927 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 LILRA4P59901 499 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 FNBP1LQ5T0N5 605 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 ZNF618Q5T7W0 954 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 CAPN12Q6ZSI9 719 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 ARHGEF18Q6ZSZ5 1173 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 CCDC121Q6ZUS5 278 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 TAX1BP1Q86VP1 789 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 PQLC3Q8N755 202 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 CENPIQ92674 756 aaPredicted RBP16.32■□□□□ 0.2
MKS1-204ENST00000537529 FAF2Q96CS3 445 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 MTG1Q9BT17 334 aaPredicted RBP16.32■□□□□ 0.2
MKS1-204ENST00000537529 C11orf84Q9BUA3 381 aaPredicted RBP16.32■□□□□ 0.2
MKS1-204ENST00000537529 SENP1Q9P0U3 644 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 PAK5Q9P286 719 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 TRPV2Q9Y5S1 764 aa16.32■□□□□ 0.2
MKS1-204ENST00000537529 GOLGA6L7A0A1B0GV03 622 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 XPO1O14980 1071 aaKnown RBP16.31■□□□□ 0.2
MKS1-204ENST00000537529 TMEM63AO94886 807 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 FAM163BP0C2L3 166 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 C6orf222P0C671 652 aaPredicted RBP16.31■□□□□ 0.2
MKS1-204ENST00000537529 INHBEP58166 350 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 LRRC14Q15048 493 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 CA9Q16790 459 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 EFHC1Q5JVL4 640 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 RGMBQ6NW40 437 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 RSPH3Q86UC2 560 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 HACE1Q8IYU2 909 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 TAB3Q8N5C8 712 aaPredicted RBP16.31■□□□□ 0.2
MKS1-204ENST00000537529 ANKS4BQ8N8V4 417 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 B3GALNT2Q8NCR0 500 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 PCDH19Q8TAB3 1148 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 CLEC4CQ8WTT0 213 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 RTP4Q96DX8 246 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 PSMC3IPQ9P2W1 217 aaPredicted RBP16.31■□□□□ 0.2
MKS1-204ENST00000537529 FETUBQ9UGM5 382 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 ZMYND8Q9ULU4 1186 aaPredicted RBP16.31■□□□□ 0.2
MKS1-204ENST00000537529 FOXO6A8MYZ6 492 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 BANF1O75531 89 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 ZBED1O96006 694 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 ZFXP17010 805 aaPredicted RBP16.31■□□□□ 0.2
MKS1-204ENST00000537529 GAD2Q05329 585 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 DPYSL2Q16555 572 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 EFHC2Q5JST6 749 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 TRABD2AQ86V40 505 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 OSTM1Q86WC4 334 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 CDKL3Q8IVW4 592 aaPredicted RBP16.31■□□□□ 0.2
MKS1-204ENST00000537529 CKAP2Q8WWK9 683 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 PPP1R10Q96QC0 940 aaKnown RBP16.31■□□□□ 0.2
MKS1-204ENST00000537529 HNRNPABQ99729 332 aaKnown RBP16.31■□□□□ 0.2
MKS1-204ENST00000537529 SLC38A7Q9NVC3 462 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.31■□□□□ 0.2
MKS1-204ENST00000537529 HEY1Q9Y5J3 304 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 CLUHO75153 1309 aa16.31■□□□□ 0.2
MKS1-204ENST00000537529 TCRBV7S3A2A0A539 114 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 BCLAF3A2AJT9 711 aaKnown RBP16.3■□□□□ 0.2
MKS1-204ENST00000537529 PTGESO14684 152 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 CHADO15335 359 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 KCNN4O15554 427 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 ATP2A2P16615 1042 aaKnown RBP16.3■□□□□ 0.2
MKS1-204ENST00000537529 CYP2F1P24903 491 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 LIG3P49916 1009 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 GEMIN4P57678 1058 aaKnown RBP16.3■□□□□ 0.2
MKS1-204ENST00000537529 GPX6P59796 221 aa16.3■□□□□ 0.2
MKS1-204ENST00000537529 ITIH4Q14624 930 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms