RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 NBPF26B4DH59 902 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 HPGDP15428 266 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 OR1G1P47890 313 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 NFYCQ13952 458 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 FUT11Q495W5 492 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 ATP6AP1LQ52LC2 224 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 TDRD10Q5VZ19 366 aaKnown RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 ANKS6Q68DC2 871 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 NEK10Q6ZWH5 1172 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 NBPF15Q8N660 670 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 ZNF614Q8N883 585 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 BLOC1S5Q8TDH9 187 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 ANKRD49Q8WVL7 239 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 HNRNPLLQ8WVV9 542 aaKnown RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 DDIT4Q9NX09 232 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 RPS6KB2Q9UBS0 482 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 ADGRA3Q8IWK6 1321 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 LINC00854A0A1B0GVQ3 168 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 PSTPIP1O43586 416 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 TRIM13O60858 407 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 RBP1P09455 135 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 GRK2P25098 689 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 RPA1P27694 616 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 GRK3P35626 688 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 EXOSC10Q01780 885 aaKnown RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 MAPK7Q13164 816 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 MTM1Q13496 603 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 SBK1Q52WX2 424 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 NOTUMQ6P988 496 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 LRRC34Q8IZ02 419 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 MYO1HQ8N1T3 1032 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 UBA3Q8TBC4 463 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 RPRD1AQ96P16 312 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 ISCA1Q9BUE6 129 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 SHCBP1LQ9BZQ2 653 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 CLEC4MQ9H2X3 399 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 DCLRE1BQ9H816 532 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 C17orf75Q9HAS0 396 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 RAD18Q9NS91 495 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 ERAP1Q9NZ08 941 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 UBQLN1Q9UMX0 589 aaKnown RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 MST1RQ04912 1400 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 MGAT4DA6NG13 374 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 SDR42E2A6NKP2 422 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 CENPXA8MT69 81 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 CYP27B1O15528 508 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 GSTM1P09488 218 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 TARSP26639 723 aaKnown RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 CSE1LP55060 971 aaKnown RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 CORO7P57737 925 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 SEL1L3Q68CR1 1132 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 ERGIC2Q96RQ1 377 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 LRRC40Q9H9A6 602 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 CAPN10Q9HC96 672 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 RHBDL2Q9NX52 303 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 MYO5AQ9Y4I1 1855 aaKnown RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 GAS2O43903 313 aaKnown RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 ENTPD3O75355 529 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 SLC25A27O95847 323 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 PIK3R1P27986 724 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 RFX3P48380 749 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 BFSP2Q13515 415 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 RSBN1Q5VWQ0 802 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 CYB5D1Q6P9G0 228 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 SCUBE1Q8IWY4 988 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 LRRN4CLQ8ND94 238 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 RDM1Q8NG50 284 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 WDR36Q8NI36 951 aaKnown RBP10.98□□□□□ -0.65
CLIP1-209ENST00000537178 KLHL28Q9NXS3 571 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 TRIM10Q9UDY6 481 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 KIAA1257Q9ULG3 409 aa10.98□□□□□ -0.65
CLIP1-209ENST00000537178 UPP2O95045 317 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 VCLP18206 1134 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 ITGALP20701 1170 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 HSD17B3P37058 310 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 SLC20A2Q08357 652 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 ITIH4Q14624 930 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 CNGA2Q16280 664 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 CASP10Q92851 521 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 WDCPQ9H6R7 721 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 VTA1Q9NP79 307 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 LNPEPQ9UIQ6 1025 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 DRG1Q9Y295 367 aaKnown RBP10.97□□□□□ -0.65
CLIP1-209ENST00000537178 ADAMTSL3P82987 1691 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 PIPSLA2A3N6 862 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 H3BMM5 538 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 CLTBP09497 229 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 TGM3Q08188 693 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 OVGP1Q12889 678 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 TRIM28Q13263 835 aaKnown RBP10.97□□□□□ -0.65
CLIP1-209ENST00000537178 NDUFA5Q16718 116 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 ACAD10Q6JQN1 1059 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 TIGD7Q6NT04 549 aaPredicted RBP10.97□□□□□ -0.65
CLIP1-209ENST00000537178 KDM7AQ6ZMT4 941 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 ZNF438Q7Z4V0 828 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 CYP4Z2PQ8N1L4 340 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 ZSWIM1Q9BR11 485 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 EMILIN2Q9BXX0 1053 aa10.97□□□□□ -0.65
CLIP1-209ENST00000537178 OSBPL6Q9BZF3 934 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms