RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 GAD2Q05329 585 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 MESP2Q0VG99 397 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 LY6G5CQ5SRR4 150 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 PMS2CLQ68D20 193 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 RNF43Q68DV7 783 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TTC30AQ86WT1 665 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SFTPA1Q8IWL2 248 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CRYBG2Q8N1P7 616 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 ALLCQ8N6M5 410 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 IL17RCQ8NAC3 791 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TXNDC5Q8NBS9 432 aaKnown RBP20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SPRYD3Q8NCJ5 442 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 MDGA1Q8NFP4 955 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 NACA2Q9H009 215 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 GMIPQ9P107 970 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 FRMD4BQ9Y2L6 1034 aa20.84■□□□□ 0.93
TNFRSF1B-204ENST00000536782 A0A1B0GVL5 298 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 KLF8O95600 359 aaPredicted RBP20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CCDC130P13994 396 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TRIM21P19474 475 aaKnown RBP20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CMA1P23946 247 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TNFRSF4P43489 277 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 NDST1P52848 882 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 KDSRQ06136 332 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 EOGTQ5NDL2 527 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 BTBD8Q5XKL5 378 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 CEP135Q66GS9 1140 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 TMEM92Q6UXU6 159 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SV2AQ7L0J3 742 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 UNC93AQ86WB7 457 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SLC2A14Q8TDB8 520 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SMOQ99835 787 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 FBXO44Q9H4M3 255 aa20.83■□□□□ 0.93
TNFRSF1B-204ENST00000536782 SGK1O00141 431 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CALUO43852 315 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 BEST1O76090 585 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 KIF20AO95235 890 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ASS1P00966 412 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 KIR2DL1P43626 348 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 MAP3K7CLP57077 242 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ORC1Q13415 861 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 EMC10Q5UCC4 262 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ZMIZ2Q8NF64 920 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 DUSP9Q99956 384 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 EDEM2Q9BV94 578 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 LSM14BQ9BX40 385 aaKnown RBP20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CSNK1G1Q9HCP0 422 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 POLMQ9NP87 494 aaPredicted RBP20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 FAM49BQ9NUQ9 324 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 HMGXB4Q9UGU5 601 aa20.82■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ASCC3Q8N3C0 2202 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CHRM1P11229 460 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 HNRNPLP14866 589 aaKnown RBP eCLIP20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 BCKDHBP21953 392 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 PIK3CAP42336 1068 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ASPAP45381 313 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 PREPLQ4J6C6 727 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 N4BP2L1Q5TBK1 243 aaPredicted RBP20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 SPOPLQ6IQ16 392 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 BBS7Q8IWZ6 715 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 PHTF2Q8N3S3 785 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 NAT16Q8N8M0 369 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 C12orf29Q8N999 325 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 OLIG1Q8TAK6 271 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 WHAMMQ8TF30 809 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 SPATA32Q96LK8 384 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TLR8Q9NR97 1041 aaKnown RBP20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 SPHK2Q9NRA0 654 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TRAF3IP3Q9Y228 551 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 HPSEQ9Y251 543 aa20.81■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TBC1D3BA6NDS4 549 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 MAPK13O15264 365 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 HOXC11O43248 304 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TLR5O60602 858 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 HLA-DRAP01903 254 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 IRF1P10914 325 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 VAMP7P51809 220 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ANO4Q32M45 955 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 C1orf220Q5T0J3 134 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 NUDT18Q6ZVK8 323 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CYP2U1Q7Z449 544 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ETFBKMTQ8IXQ9 262 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CCDC47Q96A33 483 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 SPACA7Q96KW9 195 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 IMPG2Q9BZV3 1241 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 BCCIPQ9P287 314 aaKnown RBP eCLIP20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 DEC1Q9P2X7 70 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 CIZ1Q9ULV3 898 aaPredicted RBP20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TNRC6BQ9UPQ9 1833 aaKnown RBP20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ZFHX4Q86UP3 3567 aa20.8■□□□□ 0.92
TNFRSF1B-204ENST00000536782 PLXND1Q9Y4D7 1925 aa20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 KHNYNO15037 678 aaKnown RBP20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TULP3O75386 442 aa20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 FAM200BP0CF97 657 aa20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 ADORA2BP29275 332 aa20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 DHPSP49366 369 aaPredicted RBP20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 TMEM25Q86YD3 366 aa20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 KCNV2Q8TDN2 545 aa20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 WBP2Q969T9 261 aa20.79■□□□□ 0.92
TNFRSF1B-204ENST00000536782 HNRNPABQ99729 332 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms