RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TSPY26PQ9H489 355 aa18.87■□□□□ 0.61
TNFRSF1A-209ENST00000536717 FBXO44Q9H4M3 255 aa18.87■□□□□ 0.61
TNFRSF1A-209ENST00000536717 CCSER2Q9H7U1 834 aa18.87■□□□□ 0.61
TNFRSF1A-209ENST00000536717 BECN2A8MW95 431 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 TRDMT1O14717 391 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 MBL2P11226 248 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 TDGF1P13385 188 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 TUBP50607 506 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 CUL2Q13617 745 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 TMEM196Q5HYL7 178 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 HECTD3Q5T447 861 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 NAIF1Q69YI7 327 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 FSTL4Q6MZW2 842 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 CPA6Q8N4T0 437 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 CNOT6LQ96LI5 555 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 HEXIM2Q96MH2 286 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 DUSP16Q9BY84 665 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 PNPLA8Q9NP80 782 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 SPAG17Q6Q759 2223 aa18.86■□□□□ 0.61
TNFRSF1A-209ENST00000536717 MARSP56192 900 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1A-209ENST00000536717 LRMPQ12912 555 aa18.85■□□□□ 0.61
TNFRSF1A-209ENST00000536717 ZC3H14Q6PJT7 736 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1A-209ENST00000536717 TRIM59Q8IWR1 403 aa18.85■□□□□ 0.61
TNFRSF1A-209ENST00000536717 UBR7Q8N806 425 aa18.85■□□□□ 0.61
TNFRSF1A-209ENST00000536717 KIAA1958Q8N8K9 716 aa18.85■□□□□ 0.61
TNFRSF1A-209ENST00000536717 DNAI2Q9GZS0 605 aa18.85■□□□□ 0.61
TNFRSF1A-209ENST00000536717 FBRSL1Q9HCM7 1045 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1A-209ENST00000536717 EML5Q05BV3 1969 aa18.85■□□□□ 0.61
TNFRSF1A-209ENST00000536717 SCAMP3O14828 347 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 ACO1P21399 889 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 CCR3P51677 355 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 KIF11P52732 1056 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 SATB1Q01826 763 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 ARHGAP17Q68EM7 881 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 SYNPOQ8N3V7 929 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 SPEM1Q8N4L4 309 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 ZBTB44Q8NCP5 570 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 LMO3Q8TAP4 145 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 SEMA4AQ9H3S1 761 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 TLR8Q9NR97 1041 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 SAMSN1Q9NSI8 373 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 FANCLQ9NW38 375 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 C2orf42Q9NWW7 574 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 CFAP97Q9P2B7 532 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 SCML2Q9UQR0 700 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 ZNF292O60281 2723 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 CYP26A1O43174 497 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 GALK1P51570 392 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 AMPD2Q01433 879 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 HSP90AA4PQ58FG1 418 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 IRF2BP1Q8IU81 584 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 DHX40Q8IX18 779 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 CBX8Q9HC52 389 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 OSER1Q9NX31 292 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 ZSCAN32Q9NX65 697 aa18.84■□□□□ 0.61
TNFRSF1A-209ENST00000536717 SDK1Q7Z5N4 2213 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 KCNJ18B7U540 433 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 P4HA2O15460 535 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TLR5O60602 858 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 NFATC1O95644 943 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 EGFP01133 1207 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TBXAS1P24557 533 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 EEF1GP26641 437 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 MTIF2P46199 727 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CXCL12P48061 93 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 KCNH2Q12809 1159 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 GRSF1Q12849 480 aaKnown RBP eCLIP18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 KCNJ12Q14500 433 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 NCAPHQ15003 741 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 IQCB1Q15051 598 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 GAB4Q2WGN9 574 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PKN3Q6P5Z2 889 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TTC30AQ86WT1 665 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 DDX42Q86XP3 938 aaKnown RBP eCLIP18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 ADGRG2Q8IZP9 1017 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 ANKRD20A12PQ8NF67 263 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 EZH1Q92800 747 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 NT5C1BQ96P26 610 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 P2RY13Q9BPV8 354 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 NMUR1Q9HB89 426 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CYLDQ9NQC7 956 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 PCDHGA2Q9Y5H1 932 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 USP3Q9Y6I4 520 aa18.83■□□□□ 0.6
TNFRSF1A-209ENST00000536717 LILRB5O75023 590 aa18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TBX18O95935 607 aa18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 LMNAP02545 664 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CYP17A1P05093 508 aa18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 TPM4P67936 248 aa18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 NR1H3Q13133 447 aa18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CDKAL1Q5VV42 579 aa18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 KAT5Q92993 513 aa18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 CD101Q93033 1021 aa18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 WBP2Q969T9 261 aa18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 FAM126AQ9BYI3 521 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 SPTBN4Q9H254 2564 aa18.82■□□□□ 0.6
TNFRSF1A-209ENST00000536717 RALGAPA1Q6GYQ0 2036 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 A0A1W2PQH9 124 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 E2F8A0AVK6 867 aa18.81■□□□□ 0.6
TNFRSF1A-209ENST00000536717 GOLGA6L19H0YKK7 550 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms