RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 NEK3P51956 506 aa16.69■□□□□ 0.26
CHMP1A-202ENST00000535997 SLC8A3P57103 927 aa16.69■□□□□ 0.26
CHMP1A-202ENST00000535997 FAAP100Q0VG06 881 aa16.69■□□□□ 0.26
CHMP1A-202ENST00000535997 CCDC14Q49A88 953 aa16.69■□□□□ 0.26
CHMP1A-202ENST00000535997 C1orf228Q6PIY5 440 aa16.69■□□□□ 0.26
CHMP1A-202ENST00000535997 SERAC1Q96JX3 654 aa16.69■□□□□ 0.26
CHMP1A-202ENST00000535997 TSSK1BQ9BXA7 367 aa16.69■□□□□ 0.26
CHMP1A-202ENST00000535997 DPP3Q9NY33 737 aa16.69■□□□□ 0.26
CHMP1A-202ENST00000535997 DIAPH2O60879 1101 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 CBX6O95503 412 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 CYP3A5P20815 502 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 MAGEA6P43360 314 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 BCAR1P56945 870 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 IGBP1P78318 339 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 CTC1Q2NKJ3 1217 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 ZNF449Q6P9G9 518 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 LRRC6Q86X45 466 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 PTPRN2Q92932 1015 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 ANKRD27Q96NW4 1050 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 C12orf65Q9H3J6 166 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 TLE6Q9H808 572 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 DCTN4Q9UJW0 460 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 BCLAF3A2AJT9 711 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 DPYSL4O14531 572 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 KCNN4O15554 427 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 AVILO75366 819 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 IL1BP01584 269 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 PFKMP08237 780 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 PYGBP11216 843 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 IREB2P48200 963 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 CDO1Q16878 200 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 LGSNQ5TDP6 509 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 TTC39BQ5VTQ0 682 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 C4orf22Q6V702 233 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 LONP2Q86WA8 852 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 ERO1BQ86YB8 467 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 MAB21L3Q8N8X9 362 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 AFG1LQ8WV93 481 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 OTUD5Q96G74 571 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 CPB2Q96IY4 423 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 ACAP3Q96P50 834 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 MROH8Q9H579 483 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 PDGFCQ9NRA1 345 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 KANSL3Q9P2N6 904 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 ZNF180Q9UJW8 692 aa16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 MTO1Q9Y2Z2 717 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-202ENST00000535997 APOL1O14791 398 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 KLF11O14901 512 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 KRT37O76014 449 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 DESP17661 470 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 LAMC2Q13753 1193 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 PRKD1Q15139 912 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 RAB6CQ53S08 254 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 WASHC2DQ5SRD0 308 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 SLC9A4Q6AI14 798 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 DLK2Q6UY11 383 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 PQLC3Q8N755 202 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 LINC01465Q8N7H1 131 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 FAM13CQ8NE31 585 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 RFWD2Q8NHY2 731 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 APBB2Q92870 758 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 LRRC39Q96DD0 335 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 PIWIL1Q96J94 861 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 FAM111AQ96PZ2 611 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 KLC2Q9H0B6 622 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 RAB6CQ9H0N0 254 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 CNTN3Q9P232 1028 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 A0A0G2JND7 137 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 ZNF487B1APH4 448 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 E7ENQ6 273 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 PIK3R2O00459 728 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 DNAJC6O75061 913 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 GRAP2O75791 330 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 C1QAP02745 245 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 CALB2P22676 271 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 SDC4P31431 198 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 ARFIP2P53365 341 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 SNX16P57768 344 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 OVGP1Q12889 678 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 SCYL2Q6P3W7 929 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 TMEM110Q86TL2 294 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 C12orf29Q8N999 325 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 SH3TC2Q8TF17 1288 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 ELP3Q9H9T3 547 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 RNPEPL1Q9HAU8 725 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 ALG13Q9NP73 1137 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 HEY2Q9UBP5 337 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 ZC3H7BQ9UGR2 993 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 AKT3Q9Y243 479 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 HEY1Q9Y5J3 304 aa16.67■□□□□ 0.26
CHMP1A-202ENST00000535997 MCM3APO60318 1980 aa16.66■□□□□ 0.26
CHMP1A-202ENST00000535997 ASB14A6NK59 587 aa16.66■□□□□ 0.26
CHMP1A-202ENST00000535997 MDM4O15151 490 aa16.66■□□□□ 0.26
CHMP1A-202ENST00000535997 CCDC22O60826 627 aa16.66■□□□□ 0.26
CHMP1A-202ENST00000535997 ZBED1O96006 694 aa16.66■□□□□ 0.26
CHMP1A-202ENST00000535997 SNRPAP09012 282 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-202ENST00000535997 GSTA2P09210 222 aa16.66■□□□□ 0.26
CHMP1A-202ENST00000535997 PRKCHP24723 683 aa16.66■□□□□ 0.26
CHMP1A-202ENST00000535997 RBL1P28749 1068 aa16.66■□□□□ 0.26
CHMP1A-202ENST00000535997 YWHAZP63104 245 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms