RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CFAP97Q9P2B7 532 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 TFIP11Q9UBB9 837 aaKnown RBP11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 HCN2Q9UL51 889 aa11.9□□□□□ -0.5
CLSTN3-206ENST00000535668 FREM2Q5SZK8 3169 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 ATP8B3O60423 1300 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 CABIN1Q9Y6J0 2220 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 A8MXQ7 604 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 NPC1O15118 1278 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 TULP3O75386 442 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 BCKDHBP21953 392 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 SLC6A11P48066 632 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 SLC5A3P53794 718 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 MYL6P60660 151 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 INCA1Q0VD86 236 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 ENPP2Q13822 863 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 HNRNPDQ14103 355 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 CCDC6Q16204 474 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 NFIL3Q16649 462 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 LY6G5CQ5SRR4 150 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 ANO7Q6IWH7 933 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 PSAPL1Q6NUJ1 521 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 SLC36A4Q6YBV0 504 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 C12orf40Q86WS4 652 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 ALLCQ8N6M5 410 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 PDILTQ8N807 584 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 TERB1Q8NA31 727 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 TXNDC5Q8NBS9 432 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 ZMIZ2Q8NF64 920 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 PLEKHO2Q8TD55 490 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 TMC2Q8TDI7 906 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 GATA6Q92908 595 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 HPS3Q969F9 1004 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 SPACA7Q96KW9 195 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 ZNF396Q96N95 335 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 DPEP3Q9H4B8 488 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 SMOC1Q9H4F8 434 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 CAPN10Q9HC96 672 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 ARHGEF4Q9NR80 690 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 SPHK2Q9NRA0 654 aa11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 MBD1Q9UIS9 605 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-206ENST00000535668 APC2O95996 2303 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 A0A1W2PQF6 199 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 PDXKO00764 312 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 ZNF217O75362 1048 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 VNN1O95497 513 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 ASS1P00966 412 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 GBP1P32455 592 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 NOVA1P51513 510 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 ASIC1P78348 528 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 CEBPZQ03701 1054 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 SLC14A1Q13336 389 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 TRPC3Q13507 836 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 STK38Q15208 465 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 SGSM1Q2NKQ1 1148 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 SH3PXD2AQ5TCZ1 1133 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 RESP18Q5W5W9 173 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 FAM35AQ86V20 835 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 FBXO32Q969P5 355 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 SNX21Q969T3 373 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 ZNF419Q96HQ0 510 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 KCNK16Q96T55 309 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 HNRNPABQ99729 332 aaKnown RBP11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 KLF16Q9BXK1 252 aaPredicted RBP11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 KCTD10Q9H3F6 313 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 TMEM74BQ9NUR3 256 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 WDR35Q9P2L0 1181 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 DEC1Q9P2X7 70 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 SCML2Q9UQR0 700 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 SLC27A6Q9Y2P4 619 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 NEUROG3Q9Y4Z2 214 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 LAMA5O15230 3695 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 PCDH15Q96QU1 1955 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 ITPR1Q14643 2758 aa11.88□□□□□ -0.51
CLSTN3-206ENST00000535668 KNTC1P50748 2209 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 A0A1W2PQD8 194 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 ANTXRLA6NF34 631 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 HHLA1C9JL84 531 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 H0Y626 953 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 K7ELQ4 463 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 AP5Z1O43299 807 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 KLRC4O43908 158 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 GJB3O75712 270 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 TRIM16O95361 564 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 KLF8O95600 359 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 CAPNS1P04632 268 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 SERPINF2P08697 491 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 SLFN14P0C7P3 912 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 MBL2P11226 248 aaPredicted RBP11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 P4HA1P13674 534 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 NTSR1P30989 418 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 PTGER3P43115 390 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 PSEN1P49768 467 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 NCOA4Q13772 614 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 ZNF667Q5HYK9 610 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 UNQ6494/PRO21346Q6UXR6 183 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 Q6ZNB5 142 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 SFTPA1Q8IWL2 248 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 SCAMP5Q8TAC9 235 aa11.87□□□□□ -0.51
CLSTN3-206ENST00000535668 CCDC127Q96BQ5 260 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms