RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 SMOQ99835 787 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 NIF3L1Q9GZT8 377 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 TMEM8AQ9HCN3 771 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 GMIPQ9P107 970 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 CFAP97Q9P2B7 532 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 CHORDC1Q9UHD1 332 aaPredicted RBP9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 USP18Q9UMW8 372 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 SLC8A2Q9UPR5 921 aa9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 RIF1Q5UIP0 2472 aaKnown RBP9.04□□□□□ -0.96
SFSWAP-202ENST00000535202 SLC9A3R1O14745 358 aaPredicted RBP9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 TNFRSF10BO14763 440 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 CETN3O15182 167 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 COCHO43405 550 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 CYP17A1P05093 508 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 FAM200BP0CF97 657 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 CNR2P34972 360 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 PRCPP42785 496 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 PSEN1P49768 467 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 MXI1P50539 228 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 SEC13P55735 322 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 ENPEPQ07075 957 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 INCA1Q0VD86 236 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 DHCR24Q15392 516 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 FBXO43Q4G163 708 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 DCAF17Q5H9S7 520 aaPredicted RBP9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 HECTD3Q5T447 861 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 ZNF658Q5TYW1 1059 aaPredicted RBP9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 KRT39Q6A163 491 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 LAIR1Q6GTX8 287 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 WDR5BQ86VZ2 330 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 DDX42Q86XP3 938 aaKnown RBP eCLIP9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 CRYBG2Q8N1P7 616 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 TXLNBQ8N3L3 684 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 ZMIZ2Q8NF64 920 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 EZH1Q92800 747 aaPredicted RBP9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 ERCC4Q92889 916 aaPredicted RBP9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 SMARCE1Q969G3 411 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 HHIPQ96QV1 700 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 TSG101Q99816 390 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 NT5C1AQ9BXI3 368 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 NACA2Q9H009 215 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 CCSER2Q9H7U1 834 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 CYP3A43Q9HB55 503 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 POLR3BQ9NW08 1133 aaPredicted RBP9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 COMMD8Q9NX08 183 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 SH3BP1Q9Y3L3 701 aa9.03□□□□□ -0.96
SFSWAP-202ENST00000535202 MYOFQ9NZM1 2061 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 STX10O60499 249 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 CILPO75339 1184 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 SMC2O95347 1197 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 IRF1P10914 325 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 HOXA6P31267 233 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 GTF2H1P32780 548 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 OPRD1P41143 372 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 SPEM2Q0P670 501 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 ZNF394Q53GI3 561 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 CCDC183Q5T5S1 534 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 TCERG1LQ5VWI1 586 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 CLEC20AQ6ZU45 233 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 GPRIN1Q7Z2K8 1008 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 GPR161Q8N6U8 529 aaKnown RBP9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 WHAMMQ8TF30 809 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 SEMA4DQ92854 862 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 ACDQ96AP0 544 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 CYFIP2Q96F07 1278 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 GSDMAQ96QA5 445 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 HNRNPABQ99729 332 aaKnown RBP9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 DNAI2Q9GZS0 605 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 FBXO44Q9H4M3 255 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 CSNK1G1Q9HCP0 422 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 PARD6AQ9NPB6 346 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 TLR8Q9NR97 1041 aaKnown RBP9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 IL37Q9NZH6 218 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 HOOK1Q9UJC3 728 aaKnown RBP9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 V9GYY5 206 aaPredicted RBP9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 EML5Q05BV3 1969 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 CFAP54Q96N23 3096 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 RALGAPA1Q6GYQ0 2036 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 OTOGLQ3ZCN5 2332 aa9.02□□□□□ -0.97
SFSWAP-202ENST00000535202 FAM92AA1XBS5 289 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 TRIM49BA6NDI0 452 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 KIF2AO00139 706 aaPredicted RBP9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 CYP26A1O43174 497 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 ATP8B1O43520 1251 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 TLR5O60602 858 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 RPP40O75818 363 aaKnown RBP9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 ADCY5O95622 1261 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 ADH1CP00326 375 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 TUBB4AP04350 444 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 RETP07949 1114 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 ZDHHC11BP0C7U3 371 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 CCDC192P0DO97 292 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 ADH5P11766 374 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 ACO1P21399 889 aaKnown RBP9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 SLC6A11P48066 632 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 PGFP49763 221 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 TUBP50607 506 aa9.01□□□□□ -0.97
SFSWAP-202ENST00000535202 PMS1P54277 932 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms