RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 CYTH1Q15438 398 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 TRMT5Q32P41 509 aaKnown RBP16.51■□□□□ 0.23
MCF2L-232ENST00000535094 PTPN20Q4JDL3 420 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 ZBTB8OSQ8IWT0 167 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 CEP120Q8N960 986 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 DCAKDQ8WVC6 231 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 ECSITQ9BQ95 431 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 ASNSD1Q9NWL6 643 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 AK5Q9Y6K8 562 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 COL22A1Q8NFW1 1626 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-232ENST00000535094 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 HSPA4LO95757 839 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 RAB27AP51159 221 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 TCEAL1Q15170 157 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 FASTKD1Q53R41 847 aaKnown RBP16.51■□□□□ 0.23
MCF2L-232ENST00000535094 VWA5B1Q5TIE3 1220 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 ENDOVQ8N8Q3 282 aaKnown RBP16.51■□□□□ 0.23
MCF2L-232ENST00000535094 EBF3Q9H4W6 596 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 PPCSQ9HAB8 311 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 XAB2Q9HCS7 855 aaKnown RBP16.51■□□□□ 0.23
MCF2L-232ENST00000535094 KANSL3Q9P2N6 904 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 SLC7A8Q9UHI5 535 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 APPL1Q9UKG1 709 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 SNCAIPQ9Y6H5 919 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 ATRNL1Q5VV63 1379 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 YWHAEP62258 255 aaKnown RBP16.51■□□□□ 0.23
MCF2L-232ENST00000535094 OASLQ15646 514 aaKnown RBP16.51■□□□□ 0.23
MCF2L-232ENST00000535094 KBTBD2Q8IY47 623 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 GALNT15Q8N3T1 639 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 FAM149B1Q96BN6 582 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 CGRRF1Q99675 332 aa16.51■□□□□ 0.23
MCF2L-232ENST00000535094 DCXO43602 365 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 COPAP53621 1224 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 LBRQ14739 615 aaKnown RBP16.5■□□□□ 0.23
MCF2L-232ENST00000535094 EFHC1Q5JVL4 640 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 MED7O43513 233 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 RARBP10826 455 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 HMGCS2P54868 508 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 RTP1P59025 263 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 GDPD5Q8WTR4 605 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 SCYL1Q96KG9 808 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 CNBD2Q96M20 576 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 FAM49BQ9NUQ9 324 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 INPP5FQ9Y2H2 1132 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 MYO18AQ92614 2054 aaKnown RBP16.5■□□□□ 0.23
MCF2L-232ENST00000535094 A6NJR5 290 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 RGL2O15211 777 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 SERPINB5P36952 375 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 CCNFP41002 786 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 DYNC1I2Q13409 638 aaKnown RBP16.5■□□□□ 0.23
MCF2L-232ENST00000535094 TRMT10BQ6PF06 316 aaKnown RBP16.5■□□□□ 0.23
MCF2L-232ENST00000535094 NKD2Q969F2 451 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-232ENST00000535094 LRGUKQ96M69 825 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 QTRT2Q9H974 415 aaKnown RBP16.5■□□□□ 0.23
MCF2L-232ENST00000535094 RNF19AQ9NV58 838 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 WDR35Q9P2L0 1181 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 SOX13Q9UN79 622 aa16.5■□□□□ 0.23
MCF2L-232ENST00000535094 PEX10O60683 326 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 DLDP09622 509 aaKnown RBP16.49■□□□□ 0.23
MCF2L-232ENST00000535094 OCRLQ01968 901 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 CNGA3Q16281 694 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 RAPH1Q70E73 1250 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 UNC5BQ8IZJ1 945 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 ZNF398Q8TD17 642 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 PRPF31Q8WWY3 499 aaKnown RBP16.49■□□□□ 0.23
MCF2L-232ENST00000535094 CDKL2Q92772 493 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 ANLNQ9NQW6 1124 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 LNPEPQ9UIQ6 1025 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 PHLPP1O60346 1717 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 ENO3P13929 434 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-232ENST00000535094 ACO1P21399 889 aaKnown RBP16.49■□□□□ 0.23
MCF2L-232ENST00000535094 GMPRP36959 345 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 PTP4A2Q12974 167 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 DNAAF3Q8N9W5 541 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 SNRNP27Q8WVK2 155 aaKnown RBP16.49■□□□□ 0.23
MCF2L-232ENST00000535094 RXFP2Q8WXD0 754 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 CPXM1Q96SM3 734 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 NRBP2Q9NSY0 501 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 HMGCRP04035 888 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 GJB1P08034 283 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 RAG1P15918 1043 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 ZNF252P-AS1Q0IIN9 211 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 N4BP2L1Q5TBK1 243 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-232ENST00000535094 ARHGAP22Q7Z5H3 698 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 SAMD3Q8N6K7 520 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 CLEC4DQ8WXI8 215 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 PANX3Q96QZ0 392 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 UNKQ9C0B0 810 aaKnown RBP16.49■□□□□ 0.23
MCF2L-232ENST00000535094 RSAD1Q9HA92 442 aa16.49■□□□□ 0.23
MCF2L-232ENST00000535094 HSD17B4P51659 736 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 ITGA9Q13797 1035 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 BBS12Q6ZW61 710 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 SLC44A1Q8WWI5 657 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 GORASP1Q9BQQ3 440 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 KRT82Q9NSB4 513 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 A8MXQ7 604 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 APOL1O14791 398 aa16.48■□□□□ 0.23
MCF2L-232ENST00000535094 SORBS2O94875 1100 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms